Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC092427.1-202ENST00000430569 476 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.5□□□□□ -2.01
NDE1Q9NXR1 AL121601.2-201ENST00000438019 707 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.5□□□□□ -2.01
NDE1Q9NXR1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.5□□□□□ -2.01
NDE1Q9NXR1 AL360271.2-201ENST00000447710 161 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 snoU13.28-201ENST00000459235 104 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 AC133134.1-201ENST00000466800 359 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 RN7SL807P-201ENST00000470923 297 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 RPL21P99-201ENST00000480369 423 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 AC022493.1-201ENST00000492984 337 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.5□□□□□ -2.01
NDE1Q9NXR1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.5□□□□□ -2.01
NDE1Q9NXR1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.5□□□□□ -2.01
NDE1Q9NXR1 RNU6-1282P-201ENST00000516735 96 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 AC009902.1-201ENST00000519351 183 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 AC025755.1-201ENST00000521306 278 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 AL137161.1-201ENST00000532231 390 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.5□□□□□ -2.01
NDE1Q9NXR1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.5□□□□□ -2.01
NDE1Q9NXR1 AMZ2P1-203ENST00000565833 850 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 MIR3609-201ENST00000582661 80 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.5□□□□□ -2.01
NDE1Q9NXR1 AC073539.2-201ENST00000597113 165 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.5□□□□□ -2.01
NDE1Q9NXR1 FTX_3.1-201ENST00000610451 147 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 uc_338.11-201ENST00000619132 160 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 AC073308.1-201ENST00000623696 305 ntBASIC2.5□□□□□ -2.01
NDE1Q9NXR1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.5□□□□□ -2.01
NDE1Q9NXR1 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
NDE1Q9NXR1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.49□□□□□ -2.01
NDE1Q9NXR1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.49□□□□□ -2.01
NDE1Q9NXR1 Y_RNA.33-201ENST00000362591 102 ntBASIC2.49□□□□□ -2.01
NDE1Q9NXR1 RNU6-371P-201ENST00000364283 108 ntBASIC2.49□□□□□ -2.01
NDE1Q9NXR1 RNU6-1179P-201ENST00000384667 107 ntBASIC2.49□□□□□ -2.01
NDE1Q9NXR1 SNORA1.3-201ENST00000384676 136 ntBASIC2.49□□□□□ -2.01
NDE1Q9NXR1 MIR301A-201ENST00000385261 86 ntBASIC2.49□□□□□ -2.01
NDE1Q9NXR1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
NDE1Q9NXR1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
NDE1Q9NXR1 RNU6-332P-201ENST00000391193 108 ntBASIC2.49□□□□□ -2.01
NDE1Q9NXR1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.49□□□□□ -2.01
NDE1Q9NXR1 RNA5SP21-201ENST00000410917 96 ntBASIC2.49□□□□□ -2.01
NDE1Q9NXR1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.49□□□□□ -2.01
NDE1Q9NXR1 SNRPEP10-201ENST00000420249 274 ntBASIC2.49□□□□□ -2.01
NDE1Q9NXR1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.49□□□□□ -2.01
NDE1Q9NXR1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.49□□□□□ -2.01
NDE1Q9NXR1 AC010099.1-201ENST00000455434 375 ntBASIC2.49□□□□□ -2.01
NDE1Q9NXR1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.49□□□□□ -2.01
NDE1Q9NXR1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.49□□□□□ -2.01
NDE1Q9NXR1 AC116353.2-201ENST00000505332 712 ntBASIC2.49□□□□□ -2.01
NDE1Q9NXR1 MTND3P25-201ENST00000509243 135 ntBASIC2.49□□□□□ -2.01
NDE1Q9NXR1 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.49□□□□□ -2.01
NDE1Q9NXR1 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.49□□□□□ -2.01
NDE1Q9NXR1 SNORD60.2-201ENST00000516883 86 ntBASIC2.49□□□□□ -2.01
NDE1Q9NXR1 MTND4P7-201ENST00000523876 130 ntBASIC2.49□□□□□ -2.01
NDE1Q9NXR1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.49□□□□□ -2.01
NDE1Q9NXR1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.49□□□□□ -2.01
NDE1Q9NXR1 MIR548AC-201ENST00000585049 88 ntBASIC2.49□□□□□ -2.01
NDE1Q9NXR1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.49□□□□□ -2.01
NDE1Q9NXR1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
NDE1Q9NXR1 AC100810.6-201ENST00000638068 285 ntBASIC2.49□□□□□ -2.01
NDE1Q9NXR1 AC004520.1-201ENST00000608362 1413 ntBASIC2.49□□□□□ -2.01
NDE1Q9NXR1 CASC19-280ENST00000642102 1351 ntBASIC2.49□□□□□ -2.01
NDE1Q9NXR1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
NDE1Q9NXR1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
NDE1Q9NXR1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NDE1Q9NXR1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NDE1Q9NXR1 Y_RNA.231-201ENST00000364358 102 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 RNU6-45P-201ENST00000384471 107 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 MIR514A2-201ENST00000385131 88 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 MIR514A3-201ENST00000385132 88 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 U3.26-201ENST00000391236 204 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 RNU6-876P-201ENST00000391295 104 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 AL162578.1-201ENST00000406202 378 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 RNA5SP120-201ENST00000410900 112 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 AC007560.1-201ENST00000426912 237 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.48□□□□□ -2.01
NDE1Q9NXR1 WASF1P1-201ENST00000447560 1131 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 TRBV1-201ENST00000476502 284 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.48□□□□□ -2.01
NDE1Q9NXR1 RNU2-69P-201ENST00000516061 100 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 AC087241.2-201ENST00000535801 324 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.48□□□□□ -2.01
NDE1Q9NXR1 MIR1273C-201ENST00000578669 77 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 AC060780.3-201ENST00000589464 80 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 AC007938.3-201ENST00000604965 623 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 ATP1B3P1-201ENST00000605365 821 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 RNU6-89P-201ENST00000606519 100 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 AC011890.2-201ENST00000613393 294 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 AC090617.10-201ENST00000624308 134 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.48□□□□□ -2.01
NDE1Q9NXR1 AC110079.1-202ENST00000635213 138 ntBASIC2.48□□□□□ -2.01
NDE1Q9NXR1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NDE1Q9NXR1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
NDE1Q9NXR1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.47□□□□□ -2.01
NDE1Q9NXR1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NDE1Q9NXR1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.47□□□□□ -2.01
NDE1Q9NXR1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
NDE1Q9NXR1 Y_RNA.86-201ENST00000363020 111 ntBASIC2.47□□□□□ -2.01
NDE1Q9NXR1 Y_RNA.303-201ENST00000364998 94 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms