Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RNA5SP315-201ENST00000516340 116 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 SNORA70.19-201ENST00000516717 90 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 Y_RNA.701-201ENST00000516812 110 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 RNU6-612P-201ENST00000516909 102 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 SNORA31.18-201ENST00000517043 134 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 RNA5SP312-201ENST00000517068 116 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.53□□□□□ -1.84
MKS1Q9NXB0 AC010653.1-201ENST00000571108 881 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.53□□□□□ -1.84
MKS1Q9NXB0 BNIP3P16-201ENST00000589779 534 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 MIR3976-201ENST00000606807 139 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 AC004832.5-201ENST00000608677 401 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.53□□□□□ -1.84
MKS1Q9NXB0 AL157817.1-201ENST00000614264 790 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 AP003355.3-201ENST00000623465 114 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MKS1Q9NXB0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.53□□□□□ -1.84
MKS1Q9NXB0 AL021368.2-201ENST00000606125 5352 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.52□□□□□ -1.85
MKS1Q9NXB0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MKS1Q9NXB0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MKS1Q9NXB0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
MKS1Q9NXB0 RNU1-105P-201ENST00000363470 161 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 U8.8-201ENST00000365399 135 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 Y_RNA.404-201ENST00000383978 102 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 RNU6-842P-201ENST00000384269 107 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 RNU6-43P-201ENST00000384302 107 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 RNU6-310P-201ENST00000384655 107 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 RNU6-19P-201ENST00000384718 107 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 Y_RNA.579-201ENST00000390939 94 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
MKS1Q9NXB0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MKS1Q9NXB0 RNA5SP293-201ENST00000410527 113 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 Y_RNA.646-201ENST00000410980 101 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MKS1Q9NXB0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.52□□□□□ -1.85
MKS1Q9NXB0 AC124916.1-201ENST00000444020 547 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.52□□□□□ -1.85
MKS1Q9NXB0 MTCO3P10-201ENST00000455912 772 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 RPL30P15-201ENST00000457129 321 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.52□□□□□ -1.85
MKS1Q9NXB0 RPS27P29-201ENST00000463110 252 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 AC133134.1-201ENST00000466800 359 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 AC114801.2-201ENST00000503825 781 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 ACA59.1-201ENST00000515966 143 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 AP005902.1-201ENST00000521358 186 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.52□□□□□ -1.85
MKS1Q9NXB0 AC006557.5-201ENST00000603126 811 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 MIR3529-201ENST00000637713 78 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.52□□□□□ -1.85
MKS1Q9NXB0 AC008669.1-201ENST00000565823 2178 ntBASIC3.52□□□□□ -1.85
MKS1Q9NXB0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MKS1Q9NXB0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.52□□□□□ -1.85
MKS1Q9NXB0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
MKS1Q9NXB0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.51□□□□□ -1.85
MKS1Q9NXB0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MKS1Q9NXB0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.51□□□□□ -1.85
MKS1Q9NXB0 SNORD56.1-201ENST00000362913 68 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 Y_RNA.187-201ENST00000363918 113 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 RNU6-596P-201ENST00000365395 98 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 RNU6-805P-201ENST00000365643 106 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 Y_RNA.394-201ENST00000383942 103 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 RNU6-843P-201ENST00000384454 104 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 MIR521-1-201ENST00000384902 87 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 AC093578.1-201ENST00000415219 368 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.51□□□□□ -1.85
MKS1Q9NXB0 AL139247.1-201ENST00000422768 325 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.51□□□□□ -1.85
MKS1Q9NXB0 Z82205.1-201ENST00000428456 297 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.51□□□□□ -1.85
MKS1Q9NXB0 RPL23AP22-201ENST00000437556 453 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.51□□□□□ -1.85
MKS1Q9NXB0 ELOCP24-201ENST00000456370 334 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 RPS4XP22-201ENST00000480755 780 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 AC097473.1-201ENST00000508142 408 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 AC005741.1-201ENST00000511094 432 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 RN7SKP282-201ENST00000516824 299 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 SNORA31.23-201ENST00000517219 133 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 PARP1P2-201ENST00000556806 195 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 AC136624.4-201ENST00000573044 370 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.51□□□□□ -1.85
MKS1Q9NXB0 AL590392.1-201ENST00000604960 446 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 AC133104.2-201ENST00000615272 193 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.51□□□□□ -1.85
MKS1Q9NXB0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
MKS1Q9NXB0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.51□□□□□ -1.85
MKS1Q9NXB0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
MKS1Q9NXB0 HAUS6P2-201ENST00000433254 2404 ntBASIC3.51□□□□□ -1.85
MKS1Q9NXB0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
MKS1Q9NXB0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
MKS1Q9NXB0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.5□□□□□ -1.85
MKS1Q9NXB0 AL513302.2-201ENST00000562313 1842 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 RNU6-799P-201ENST00000363567 107 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 MIR767-201ENST00000390228 109 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 RNU6-174P-201ENST00000410406 106 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 RNU6-1245P-201ENST00000411130 106 ntBASIC3.5□□□□□ -1.85
MKS1Q9NXB0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms