Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.11□□□□□ -2.07
HPF1Q9NWY4 BNIP3P39-201ENST00000601077 554 ntBASIC2.11□□□□□ -2.07
HPF1Q9NWY4 AC093648.1-201ENST00000623546 606 ntBASIC2.11□□□□□ -2.07
HPF1Q9NWY4 AL157786.1-207ENST00000627771 695 ntBASIC2.11□□□□□ -2.07
HPF1Q9NWY4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.11□□□□□ -2.07
HPF1Q9NWY4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HPF1Q9NWY4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.1□□□□□ -2.07
HPF1Q9NWY4 MIR21-201ENST00000362134 72 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 MIR578-201ENST00000384828 96 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 RPS3AP36-201ENST00000398190 775 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 RNA5SP390-201ENST00000410191 113 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 RNA5SP111-201ENST00000411386 101 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.1□□□□□ -2.07
HPF1Q9NWY4 AC244636.1-201ENST00000421152 228 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 SRIP2-201ENST00000428470 166 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.1□□□□□ -2.07
HPF1Q9NWY4 MTND2P29-201ENST00000438595 412 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 RN7SKP256-201ENST00000517201 314 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 DUXAP5-201ENST00000529668 529 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 AC008751.2-201ENST00000597885 980 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.1□□□□□ -2.07
HPF1Q9NWY4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.1□□□□□ -2.07
HPF1Q9NWY4 AC012360.2-201ENST00000609349 391 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 Z82243.1-201ENST00000609432 473 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 AC138749.5-201ENST00000611461 208 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 AL773524.1-201ENST00000614065 229 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 MIR7844-201ENST00000616161 122 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 AC116165.2-201ENST00000616705 206 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 AC098657.3-201ENST00000620434 263 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 AC009878.1-201ENST00000621819 340 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 AC007792.1-201ENST00000623023 402 ntBASIC2.1□□□□□ -2.07
HPF1Q9NWY4 FARSBP1-201ENST00000435808 1778 ntBASIC2.09□□□□□ -2.07
HPF1Q9NWY4 MIRLET7G-201ENST00000362280 84 ntBASIC2.09□□□□□ -2.07
HPF1Q9NWY4 RNU6-1214P-201ENST00000363650 109 ntBASIC2.09□□□□□ -2.07
HPF1Q9NWY4 RNU1-51P-201ENST00000365345 176 ntBASIC2.09□□□□□ -2.07
HPF1Q9NWY4 RNU6-611P-201ENST00000384276 104 ntBASIC2.09□□□□□ -2.07
HPF1Q9NWY4 SNORA24.1-201ENST00000384401 135 ntBASIC2.09□□□□□ -2.07
HPF1Q9NWY4 MIR29B2-201ENST00000385055 81 ntBASIC2.09□□□□□ -2.07
HPF1Q9NWY4 RNA5SP465-201ENST00000391195 109 ntBASIC2.09□□□□□ -2.07
HPF1Q9NWY4 CBX3P9-201ENST00000402326 552 ntBASIC2.09□□□□□ -2.07
HPF1Q9NWY4 HMGB3P2-201ENST00000411913 584 ntBASIC2.09□□□□□ -2.07
HPF1Q9NWY4 AL139415.2-201ENST00000431968 163 ntBASIC2.09□□□□□ -2.07
HPF1Q9NWY4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.09□□□□□ -2.07
HPF1Q9NWY4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
HPF1Q9NWY4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.09□□□□□ -2.07
HPF1Q9NWY4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.09□□□□□ -2.07
HPF1Q9NWY4 SNORA43.2-201ENST00000516652 128 ntBASIC2.09□□□□□ -2.07
HPF1Q9NWY4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.09□□□□□ -2.07
HPF1Q9NWY4 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
HPF1Q9NWY4 AC012065.4-201ENST00000602445 679 ntBASIC2.09□□□□□ -2.07
HPF1Q9NWY4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
HPF1Q9NWY4 AC027807.2-201ENST00000616099 408 ntBASIC2.09□□□□□ -2.07
HPF1Q9NWY4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
HPF1Q9NWY4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.08
HPF1Q9NWY4 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HPF1Q9NWY4 RNY1P12-201ENST00000364251 105 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HPF1Q9NWY4 RAP1BP3-201ENST00000407180 549 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 RN7SKP223-201ENST00000410582 62 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 RNU2-8P-201ENST00000410727 190 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
HPF1Q9NWY4 AC074117.2-201ENST00000417130 397 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.08□□□□□ -2.08
HPF1Q9NWY4 PGBD4P6-201ENST00000421501 610 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 DPH3P2-201ENST00000422618 250 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 HMGB1P31-201ENST00000437242 427 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 USP9YP12-201ENST00000450481 570 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 snoU13.14-201ENST00000459372 104 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.08□□□□□ -2.08
HPF1Q9NWY4 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.08□□□□□ -2.08
HPF1Q9NWY4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.08□□□□□ -2.08
HPF1Q9NWY4 AC022616.8-201ENST00000533569 253 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.08□□□□□ -2.08
HPF1Q9NWY4 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.08□□□□□ -2.08
HPF1Q9NWY4 MIR1273D-201ENST00000577266 86 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 MIR3908-201ENST00000579798 126 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 MIR5692A1-201ENST00000580523 69 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 AC112191.3-201ENST00000604371 277 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 AC116312.1-201ENST00000606841 314 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 AC004908.3-201ENST00000610248 625 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.08□□□□□ -2.08
HPF1Q9NWY4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 AC026585.1-201ENST00000619582 524 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 MIR6132-201ENST00000622083 109 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 MIR6766-201ENST00000622641 72 ntBASIC2.08□□□□□ -2.08
HPF1Q9NWY4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HPF1Q9NWY4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HPF1Q9NWY4 AC002543.1-201ENST00000299783 1954 ntBASIC2.07□□□□□ -2.08
HPF1Q9NWY4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.07□□□□□ -2.08
HPF1Q9NWY4 RNU6-384P-201ENST00000364900 104 ntBASIC2.07□□□□□ -2.08
HPF1Q9NWY4 RNU5E-5P-201ENST00000365379 116 ntBASIC2.07□□□□□ -2.08
HPF1Q9NWY4 SNORD14D-201ENST00000384390 87 ntBASIC2.07□□□□□ -2.08
HPF1Q9NWY4 MIR221-201ENST00000385135 110 ntBASIC2.07□□□□□ -2.08
HPF1Q9NWY4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.07□□□□□ -2.08
HPF1Q9NWY4 USP9YP8-201ENST00000441913 500 ntBASIC2.07□□□□□ -2.08
HPF1Q9NWY4 PRELID3BP1-201ENST00000457142 540 ntBASIC2.07□□□□□ -2.08
HPF1Q9NWY4 SNORA3.4-201ENST00000515969 96 ntBASIC2.07□□□□□ -2.08
HPF1Q9NWY4 Y_RNA.672-201ENST00000516289 104 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms