Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.56□□□□□ -1.84
CCM2LQ9NUG4 HMGN2P13-201ENST00000476476 274 ntBASIC3.56□□□□□ -1.84
CCM2LQ9NUG4 RNU6-976P-201ENST00000516086 111 ntBASIC3.56□□□□□ -1.84
CCM2LQ9NUG4 SNORD19.2-201ENST00000516978 73 ntBASIC3.56□□□□□ -1.84
CCM2LQ9NUG4 RNU6-711P-201ENST00000517255 106 ntBASIC3.56□□□□□ -1.84
CCM2LQ9NUG4 RNA5SP179-201ENST00000517284 121 ntBASIC3.56□□□□□ -1.84
CCM2LQ9NUG4 AP005902.1-201ENST00000521358 186 ntBASIC3.56□□□□□ -1.84
CCM2LQ9NUG4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.56□□□□□ -1.84
CCM2LQ9NUG4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.56□□□□□ -1.84
CCM2LQ9NUG4 MIR3186-201ENST00000577404 85 ntBASIC3.56□□□□□ -1.84
CCM2LQ9NUG4 AC091167.4-201ENST00000605079 184 ntBASIC3.56□□□□□ -1.84
CCM2LQ9NUG4 MIR8076-201ENST00000611401 83 ntBASIC3.56□□□□□ -1.84
CCM2LQ9NUG4 AC092628.2-201ENST00000622492 339 ntBASIC3.56□□□□□ -1.84
CCM2LQ9NUG4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.56□□□□□ -1.84
CCM2LQ9NUG4 AC092608.2-201ENST00000624427 218 ntBASIC3.56□□□□□ -1.84
CCM2LQ9NUG4 AC009093.8-201ENST00000641769 292 ntBASIC3.56□□□□□ -1.84
CCM2LQ9NUG4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCM2LQ9NUG4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCM2LQ9NUG4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 AC058791.1-201ENST00000608412 3198 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 MTND4P27-201ENST00000450813 1354 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 U1.1-201ENST00000384101 164 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 AL591034.2-201ENST00000402839 359 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 FTH1P15-201ENST00000406984 280 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 RNU6-174P-201ENST00000410406 106 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 AC091286.1-201ENST00000431233 461 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 RPL21P11-201ENST00000461458 483 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 MED28P2-201ENST00000475771 317 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 RAC1P2-201ENST00000511164 579 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 RNA5SP208-201ENST00000516156 78 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 RNU6-581P-201ENST00000516214 105 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 SCARNA16.2-201ENST00000516520 172 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 SNORA31.18-201ENST00000517043 134 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 AP003072.1-201ENST00000531740 145 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 CR383656.8-201ENST00000549046 145 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 AC078795.3-201ENST00000602913 472 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 Y_RNA.812-201ENST00000610788 101 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 Y_RNA.784-201ENST00000613803 101 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 Y_RNA.787-201ENST00000616522 101 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 Y_RNA.780-201ENST00000617336 101 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 Y_RNA.801-201ENST00000619005 101 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 AC004944.1-201ENST00000517807 3059 ntBASIC3.55□□□□□ -1.84
CCM2LQ9NUG4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 MIR34B-201ENST00000385076 84 ntBASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 AL590004.1-201ENST00000405321 300 ntBASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 RPL23AP50-201ENST00000434149 455 ntBASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 AL161651.1-201ENST00000440882 223 ntBASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 AC012308.1-201ENST00000451232 178 ntBASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 AL031183.1-201ENST00000457667 207 ntBASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 MIR2053-201ENST00000459295 91 ntBASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 AL049830.2-201ENST00000480072 201 ntBASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 ANP32BP3-201ENST00000559213 706 ntBASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 AC020661.2-201ENST00000560114 134 ntBASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 AC009163.5-201ENST00000575421 637 ntBASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 MIR4273-201ENST00000582824 84 ntBASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 AL034408.1-202ENST00000636088 415 ntBASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 MIR3529-201ENST00000637713 78 ntBASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 AL161912.2-201ENST00000565707 3007 ntBASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCM2LQ9NUG4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 HAUS6P2-201ENST00000433254 2404 ntBASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 RNU6-1115P-201ENST00000362490 106 ntBASIC3.53□□□□□ -1.84
CCM2LQ9NUG4 RNU6-227P-201ENST00000362865 103 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms