Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 AC023813.2-201ENST00000564321 469 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 MIR5094-201ENST00000578766 85 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 NIFKP6-201ENST00000598115 845 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 AC093732.2-201ENST00000607950 274 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 MIR6817-201ENST00000615588 66 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 uc_338.12-201ENST00000616344 181 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 AC024940.5-201ENST00000622889 474 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 AC120349.3-201ENST00000624377 529 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 AC002543.1-201ENST00000299783 1954 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 RPL32P3-201ENST00000359025 275 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 RNA5SP479-201ENST00000364858 117 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 RNY3P13-201ENST00000365542 102 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6-190P-201ENST00000384154 102 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 MIR10A-201ENST00000385043 110 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 MIR548B-201ENST00000385247 97 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6-360P-201ENST00000390944 104 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 RNU2-52P-201ENST00000410680 190 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 ELOCP17-201ENST00000414751 326 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 ELOCP9-201ENST00000418624 239 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 EIF1P1-201ENST00000421436 341 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AL008629.1-201ENST00000438615 184 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 HSPE1P9-201ENST00000440046 311 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AC007969.2-201ENST00000441891 191 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 SNRPGP13-201ENST00000442212 177 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 GDI2P2-201ENST00000445131 608 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 HMGN2P18-201ENST00000450680 270 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AC012308.1-201ENST00000451232 178 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 NDUFA5P12-201ENST00000503796 343 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 RNA5SP404-201ENST00000517118 132 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AC026464.5-201ENST00000562497 722 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AC007224.1-201ENST00000564410 144 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AL136363.2-201ENST00000604173 851 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AC112220.3-201ENST00000605502 502 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 OR2AS2P-201ENST00000606902 342 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AC013412.1-201ENST00000610687 192 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 MIR8063-201ENST00000621930 81 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AC007792.1-201ENST00000623023 402 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AL356863.1-201ENST00000623378 1080 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 SCARNA4-202ENST00000625402 129 ntBASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 WDR75-207ENST00000631047 270 ntTSL 5 BASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CDC42SE1Q9NRR8 OR4G2P-201ENST00000328113 903 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 U8.1-201ENST00000362843 134 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 RNA5SP374-201ENST00000362939 125 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6-203P-201ENST00000384038 104 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6-1257P-201ENST00000384625 110 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 MTND4P20-201ENST00000424125 869 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 AC245047.4-201ENST00000433189 144 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 RPL30P12-201ENST00000474666 353 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 AC079140.2-201ENST00000506193 142 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 MTCO3P9-201ENST00000506989 781 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 AC097473.1-201ENST00000508142 408 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 RNA5SP148-201ENST00000516527 94 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 Y_RNA.689-201ENST00000516589 107 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 RNA5SP437-201ENST00000517249 129 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 CENPUP1-201ENST00000526649 1202 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 CYP3A52P-201ENST00000563326 91 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 AC091135.1-201ENST00000585943 307 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 AL606834.3-201ENST00000602615 496 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 AC068620.3-201ENST00000602749 560 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 AC025754.2-201ENST00000606491 432 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 AC144521.1-201ENST00000607148 956 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 AC091965.4-201ENST00000607691 587 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 RMST_7.1-201ENST00000621935 268 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 MIR219B-201ENST00000637023 88 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 ATP8A2P3-201ENST00000426792 1536 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 AC092104.1-201ENST00000497346 1441 ntBASIC0.63□□□□□ -2.31
CDC42SE1Q9NRR8 SNORD116.1-201ENST00000365628 92 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6-723P-201ENST00000383973 107 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6-26P-201ENST00000383985 107 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 MIR194-1-201ENST00000384892 85 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 RPL23AP32-201ENST00000395315 459 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AL357139.1-201ENST00000407792 426 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms