Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MIR2276-201ENST00000516886 89 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 SNORA31.21-201ENST00000517180 77 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 HPRT1P3-201ENST00000539521 576 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 TRAV32-201ENST00000553993 340 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 AL121821.2-201ENST00000556081 394 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 AC034105.4-201ENST00000568304 277 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 MIR5690-201ENST00000583739 73 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 AC024220.1-201ENST00000603675 484 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 AC009314.1-201ENST00000603871 304 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 AC011890.2-201ENST00000613393 294 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 PISRT1.1-201ENST00000616930 107 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 U4.7-201ENST00000638126 106 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 RNA5SP124-201ENST00000362739 110 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 Y_RNA.151-201ENST00000363566 112 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 RNU4-76P-201ENST00000364509 141 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 SNORA73.2-201ENST00000364946 201 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 Y_RNA.315-201ENST00000365117 102 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 RNU1-100P-201ENST00000365255 165 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 RNU6-306P-201ENST00000384617 107 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 MIR200C-201ENST00000384980 68 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 MIR517A-201ENST00000385001 87 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 RNY4P36-201ENST00000391116 96 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 MTCYBP4-201ENST00000401524 249 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 RNA5SP293-201ENST00000410527 113 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 AL356968.1-201ENST00000416622 474 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 AC245291.1-201ENST00000419501 328 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 MTND1P14-201ENST00000427400 950 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 AC097713.2-201ENST00000430199 356 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 HIGD1AP11-201ENST00000438361 280 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 AC012308.1-201ENST00000451232 178 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 SNORA43.2-201ENST00000516652 128 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 AC022634.1-201ENST00000520765 532 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 AC006199.1-201ENST00000548728 219 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 AC103996.1-201ENST00000555468 102 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 MIR4429-201ENST00000580105 73 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 AC006130.2-201ENST00000586202 326 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 AC024153.1-201ENST00000603103 365 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 AL591516.1-201ENST00000611326 274 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 AC135507.2-201ENST00000612443 309 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 AC133104.2-201ENST00000615272 193 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 AL160413.1-201ENST00000622780 310 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 MTND4LP32-201ENST00000636111 270 ntBASIC3.34□□□□□ -1.87
TRIM54Q9BYV2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRIM54Q9BYV2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
TRIM54Q9BYV2 AL079305.1-201ENST00000623159 3008 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 RNU6-858P-201ENST00000362436 107 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 RNU6-527P-201ENST00000363425 104 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 SNORA62.3-201ENST00000365110 153 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 PTMAP2-201ENST00000397627 327 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 RNU6-325P-201ENST00000411132 105 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 Z99755.1-201ENST00000414048 380 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 RPS29P4-201ENST00000414733 161 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 SYF2P2-201ENST00000417620 583 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 SAR1AP4-201ENST00000429225 591 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 AC116655.1-201ENST00000508324 901 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 RNU6-581P-201ENST00000516214 105 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 Y_RNA.708-201ENST00000516950 96 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 Y_RNA.718-201ENST00000517110 102 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 APOOP3-201ENST00000536787 586 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 AL133255.1-201ENST00000606374 441 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 AC084781.2-201ENST00000615568 161 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 MTND4P23-201ENST00000447723 1363 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 MAPK10-362ENST00000641864 4484 ntBASIC3.33□□□□□ -1.88
TRIM54Q9BYV2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 RPL9P7-201ENST00000330965 580 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms