Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.39□□□□□ -2.03
VGLL1Q99990 RNU6-1213P-201ENST00000517075 94 ntBASIC2.39□□□□□ -2.03
VGLL1Q99990 RNA5SP290-201ENST00000517133 127 ntBASIC2.39□□□□□ -2.03
VGLL1Q99990 AC025755.1-201ENST00000521306 278 ntBASIC2.39□□□□□ -2.03
VGLL1Q99990 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VGLL1Q99990 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.39□□□□□ -2.03
VGLL1Q99990 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.39□□□□□ -2.03
VGLL1Q99990 HIGD1AP1-201ENST00000550979 275 ntBASIC2.39□□□□□ -2.03
VGLL1Q99990 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.39□□□□□ -2.03
VGLL1Q99990 AL442663.2-201ENST00000554385 511 ntBASIC2.39□□□□□ -2.03
VGLL1Q99990 MIR3922-201ENST00000585192 84 ntBASIC2.39□□□□□ -2.03
VGLL1Q99990 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.39□□□□□ -2.03
VGLL1Q99990 ELOCP5-201ENST00000604924 333 ntBASIC2.39□□□□□ -2.03
VGLL1Q99990 AL110115.1-201ENST00000614396 364 ntBASIC2.39□□□□□ -2.03
VGLL1Q99990 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.39□□□□□ -2.03
VGLL1Q99990 AL136164.4-201ENST00000625013 2135 ntBASIC2.39□□□□□ -2.03
VGLL1Q99990 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VGLL1Q99990 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
VGLL1Q99990 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.39□□□□□ -2.03
VGLL1Q99990 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VGLL1Q99990 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
VGLL1Q99990 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VGLL1Q99990 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.38□□□□□ -2.03
VGLL1Q99990 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VGLL1Q99990 RNA5SP50-201ENST00000363731 107 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 Y_RNA.187-201ENST00000363918 113 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 Y_RNA.216-201ENST00000364205 93 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 RNU6-593P-201ENST00000364716 112 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 RNU6-166P-201ENST00000384371 107 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 RNU6-601P-201ENST00000384540 107 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 RNU6-310P-201ENST00000384655 107 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 MIR325-201ENST00000385260 98 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 SNORD73A-201ENST00000386062 65 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 RNU6-1197P-201ENST00000391183 107 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.38□□□□□ -2.03
VGLL1Q99990 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VGLL1Q99990 Y_RNA.646-201ENST00000410980 101 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.38□□□□□ -2.03
VGLL1Q99990 Z82205.1-201ENST00000428456 297 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.38□□□□□ -2.03
VGLL1Q99990 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.38□□□□□ -2.03
VGLL1Q99990 KPNA2P1-201ENST00000458289 1591 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 AC026801.1-201ENST00000497178 464 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.38□□□□□ -2.03
VGLL1Q99990 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VGLL1Q99990 AC116337.1-201ENST00000509680 687 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 RPL39P5-202ENST00000512505 151 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 MIR892C-201ENST00000516410 77 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 RNU6-1016P-201ENST00000516689 94 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 RNA5SP468-201ENST00000516782 93 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 RNU6-143P-201ENST00000516942 93 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 RNA5SP165-201ENST00000517142 115 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.38□□□□□ -2.03
VGLL1Q99990 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.38□□□□□ -2.03
VGLL1Q99990 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.38□□□□□ -2.03
VGLL1Q99990 AC026371.1-201ENST00000551867 419 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.38□□□□□ -2.03
VGLL1Q99990 MTCO3P13-201ENST00000577757 781 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 MIR4474-201ENST00000579189 78 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.38□□□□□ -2.03
VGLL1Q99990 MIR2682-201ENST00000580305 110 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 MIR3171-201ENST00000584270 74 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 AC004805.2-201ENST00000605382 482 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 RNU6-85P-201ENST00000605989 107 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.38□□□□□ -2.03
VGLL1Q99990 AC107871.2-201ENST00000612894 502 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 uc_338.25-201ENST00000613756 156 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.38□□□□□ -2.03
VGLL1Q99990 U2.21-201ENST00000637295 81 ntBASIC2.38□□□□□ -2.03
VGLL1Q99990 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VGLL1Q99990 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.37□□□□□ -2.03
VGLL1Q99990 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VGLL1Q99990 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
VGLL1Q99990 AL049641.1-201ENST00000441055 1948 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 MIR412-201ENST00000362142 91 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 RNU6-50P-201ENST00000362356 103 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 Y_RNA.128-201ENST00000363391 112 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 SNORA63-201ENST00000363450 132 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VGLL1Q99990 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
VGLL1Q99990 DEFB109C-201ENST00000382575 264 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 DEFB109B-201ENST00000382656 264 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 Y_RNA.404-201ENST00000383978 102 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 RNU6-217P-201ENST00000384164 104 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 Y_RNA.473-201ENST00000384333 102 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 MIR134-201ENST00000385258 73 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 AL357075.1-201ENST00000404107 726 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 MIR548P-201ENST00000408336 84 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.37□□□□□ -2.03
VGLL1Q99990 RNA5SP129-201ENST00000410276 118 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 AC091286.1-201ENST00000431233 461 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 HMGN2P31-201ENST00000432430 273 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 AL645568.3-201ENST00000433683 316 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.37□□□□□ -2.03
VGLL1Q99990 RPS12P18-201ENST00000442381 270 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 RNU7-187P-201ENST00000458985 68 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 RPS23P3-201ENST00000470993 430 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 HMGN1P10-201ENST00000474557 553 ntBASIC2.37□□□□□ -2.03
VGLL1Q99990 HMGB1P30-201ENST00000492455 606 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms