Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RPL23AP49-201ENST00000492925 468 ntBASIC3.37□□□□□ -1.87
VRK1Q99986 SNORD19.2-201ENST00000516978 73 ntBASIC3.37□□□□□ -1.87
VRK1Q99986 SNORA31.18-201ENST00000517043 134 ntBASIC3.37□□□□□ -1.87
VRK1Q99986 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.37□□□□□ -1.87
VRK1Q99986 CYCSP30-201ENST00000546447 172 ntBASIC3.37□□□□□ -1.87
VRK1Q99986 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.37□□□□□ -1.87
VRK1Q99986 MIR4273-201ENST00000582824 84 ntBASIC3.37□□□□□ -1.87
VRK1Q99986 MIR3158-1-201ENST00000583596 81 ntBASIC3.37□□□□□ -1.87
VRK1Q99986 AC020895.1-201ENST00000595362 272 ntBASIC3.37□□□□□ -1.87
VRK1Q99986 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.37□□□□□ -1.87
VRK1Q99986 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.37□□□□□ -1.87
VRK1Q99986 CR392039.5-201ENST00000623201 510 ntBASIC3.37□□□□□ -1.87
VRK1Q99986 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.37□□□□□ -1.87
VRK1Q99986 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.37□□□□□ -1.87
VRK1Q99986 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
VRK1Q99986 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.37□□□□□ -1.87
VRK1Q99986 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
VRK1Q99986 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.37□□□□□ -1.87
VRK1Q99986 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VRK1Q99986 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VRK1Q99986 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VRK1Q99986 HAUS6P2-201ENST00000433254 2404 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VRK1Q99986 MTND5P30-201ENST00000452896 1731 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VRK1Q99986 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VRK1Q99986 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
VRK1Q99986 Y_RNA.5-201ENST00000362334 102 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 RNU6-227P-201ENST00000362865 103 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 RNU6-527P-201ENST00000363425 104 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 RNA5SP399-201ENST00000364003 117 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 Y_RNA.202-201ENST00000364083 110 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 RNU6-213P-201ENST00000384051 104 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 Y_RNA.463-201ENST00000384271 102 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 SNORD116-20-201ENST00000384529 92 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 MIR521-1-201ENST00000384902 87 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
VRK1Q99986 HLFP1-201ENST00000402375 499 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 RN7SKP156-201ENST00000410308 342 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 AP000275.1-201ENST00000411943 390 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 AC074117.2-201ENST00000417130 397 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.36□□□□□ -1.87
VRK1Q99986 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.36□□□□□ -1.87
VRK1Q99986 AC018865.2-201ENST00000423631 129 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 AL445584.1-201ENST00000431451 330 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 AL591043.1-201ENST00000432461 424 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 RPS15AP5-201ENST00000436276 388 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.36□□□□□ -1.87
VRK1Q99986 AL118496.2-201ENST00000448300 230 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.36□□□□□ -1.87
VRK1Q99986 MIR2053-201ENST00000459295 91 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 AL163540.1-201ENST00000485382 386 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 RNU6-581P-201ENST00000516214 105 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 AC093331.1-201ENST00000521474 169 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.36□□□□□ -1.87
VRK1Q99986 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.36□□□□□ -1.87
VRK1Q99986 MTCO3P13-201ENST00000577757 781 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
VRK1Q99986 PWAR6-201ENST00000552334 4618 ntBASIC3.36□□□□□ -1.87
VRK1Q99986 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
VRK1Q99986 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VRK1Q99986 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VRK1Q99986 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.35□□□□□ -1.87
VRK1Q99986 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VRK1Q99986 Y_RNA.252-201ENST00000364556 101 ntBASIC3.35□□□□□ -1.87
VRK1Q99986 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.35□□□□□ -1.87
VRK1Q99986 SNORA3.3-201ENST00000408712 125 ntBASIC3.35□□□□□ -1.87
VRK1Q99986 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.35□□□□□ -1.87
VRK1Q99986 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.35□□□□□ -1.87
VRK1Q99986 AC243428.1-201ENST00000421099 264 ntBASIC3.35□□□□□ -1.87
VRK1Q99986 PMCHL1-202ENST00000423102 261 ntBASIC3.35□□□□□ -1.87
VRK1Q99986 BX276092.3-201ENST00000424182 230 ntBASIC3.35□□□□□ -1.87
VRK1Q99986 AL365496.1-201ENST00000426885 215 ntBASIC3.35□□□□□ -1.87
VRK1Q99986 GOT2P5-201ENST00000433995 546 ntBASIC3.35□□□□□ -1.87
VRK1Q99986 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VRK1Q99986 U3.44-201ENST00000458938 192 ntBASIC3.35□□□□□ -1.87
VRK1Q99986 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.35□□□□□ -1.87
VRK1Q99986 SNORA67.7-201ENST00000516664 135 ntBASIC3.35□□□□□ -1.87
VRK1Q99986 SNORA31.21-201ENST00000517180 77 ntBASIC3.35□□□□□ -1.87
VRK1Q99986 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.35□□□□□ -1.87
VRK1Q99986 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.35□□□□□ -1.87
VRK1Q99986 AC009163.5-201ENST00000575421 637 ntBASIC3.35□□□□□ -1.87
VRK1Q99986 MIR5696-201ENST00000578474 85 ntBASIC3.35□□□□□ -1.87
VRK1Q99986 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.35□□□□□ -1.87
VRK1Q99986 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VRK1Q99986 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
VRK1Q99986 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
VRK1Q99986 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VRK1Q99986 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VRK1Q99986 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
VRK1Q99986 Y_RNA.132-201ENST00000363421 102 ntBASIC3.34□□□□□ -1.87
VRK1Q99986 Y_RNA.422-201ENST00000384054 114 ntBASIC3.34□□□□□ -1.87
VRK1Q99986 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.34□□□□□ -1.87
VRK1Q99986 AL161651.1-201ENST00000440882 223 ntBASIC3.34□□□□□ -1.87
VRK1Q99986 RPL21P23-201ENST00000446654 460 ntBASIC3.34□□□□□ -1.87
VRK1Q99986 HMGN2P13-201ENST00000476476 274 ntBASIC3.34□□□□□ -1.87
VRK1Q99986 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.34□□□□□ -1.87
VRK1Q99986 AC097462.2-201ENST00000504623 481 ntBASIC3.34□□□□□ -1.87
VRK1Q99986 AC022493.2-201ENST00000506122 481 ntBASIC3.34□□□□□ -1.87
VRK1Q99986 RNU6-264P-201ENST00000517134 104 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms