Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 AC126177.3-201ENST00000551839 688 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 OR11H5P-201ENST00000554039 926 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 AF038458.1-201ENST00000588406 262 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 AL022345.1-201ENST00000607292 135 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 AL355802.3-201ENST00000607571 545 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 AC093838.1-201ENST00000613014 469 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 TUG1_2.1-201ENST00000614234 87 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.14□□□□□ -1.91
MEIS3Q99687 TPTE2P4-201ENST00000258589 1605 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
MEIS3Q99687 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
MEIS3Q99687 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.13□□□□□ -1.91
MEIS3Q99687 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.13□□□□□ -1.91
MEIS3Q99687 Y_RNA.202-201ENST00000364083 110 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.13□□□□□ -1.91
MEIS3Q99687 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
MEIS3Q99687 RNU6-328P-201ENST00000390887 106 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 RNU6-821P-201ENST00000390995 107 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 AL592114.1-201ENST00000403842 483 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 RN7SKP158-201ENST00000410453 326 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 Y_RNA.605-201ENST00000410577 105 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 AC074085.1-201ENST00000413598 418 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 BX682237.1-201ENST00000415016 335 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.13□□□□□ -1.91
MEIS3Q99687 AL160004.2-201ENST00000432935 350 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 MTND3P2-201ENST00000438452 342 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 AC234775.1-201ENST00000454247 670 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 SNRPGP5-201ENST00000456003 220 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 AC008481.1-201ENST00000463278 396 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 RPL21P8-201ENST00000465083 535 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 KLHL2P1-201ENST00000508691 521 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 AC098591.2-201ENST00000510152 315 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 RNU6-390P-201ENST00000516259 103 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.13□□□□□ -1.91
MEIS3Q99687 AC109329.2-201ENST00000519658 482 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 AC006254.3-201ENST00000603353 884 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 FAM157A-202ENST00000615155 405 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 AC008121.3-201ENST00000618726 433 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 uc_338.22-201ENST00000622722 187 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 MTND5P42-201ENST00000637720 498 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MEIS3Q99687 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
MEIS3Q99687 PABPC1P7-201ENST00000413177 1513 ntBASIC3.13□□□□□ -1.91
MEIS3Q99687 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.13□□□□□ -1.91
MEIS3Q99687 AC069528.2-201ENST00000624849 1991 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
MEIS3Q99687 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
MEIS3Q99687 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
MEIS3Q99687 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
MEIS3Q99687 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
MEIS3Q99687 RNU6-960P-201ENST00000364056 120 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 Y_RNA.212-201ENST00000364177 102 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 RNA5SP167-201ENST00000365461 116 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 RNU6-26P-201ENST00000383985 107 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 RNU6-1013P-201ENST00000384180 107 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 SNORD70.1-201ENST00000391007 85 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 RNU6-754P-201ENST00000391166 107 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.12□□□□□ -1.91
MEIS3Q99687 AL590632.1-201ENST00000424289 371 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
MEIS3Q99687 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.12□□□□□ -1.91
MEIS3Q99687 RPL36AP6-201ENST00000435770 321 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.12□□□□□ -1.91
MEIS3Q99687 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 HMGN2P21-201ENST00000447764 270 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.12□□□□□ -1.91
MEIS3Q99687 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
MEIS3Q99687 AC130509.1-201ENST00000464158 433 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 DYNLL1P5-201ENST00000467158 270 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 AC087884.1-201ENST00000469738 328 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 AP001086.1-201ENST00000494882 321 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 MTCO1P29-201ENST00000496868 288 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 RPL23AP55-201ENST00000498163 452 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 RPS27P27-201ENST00000498779 255 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 PTP4A1P4-201ENST00000512479 322 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.12□□□□□ -1.91
MEIS3Q99687 MIR5092-201ENST00000583139 88 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 AC136443.5-201ENST00000603741 370 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.12□□□□□ -1.91
MEIS3Q99687 AL450472.3-201ENST00000615578 367 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 AL713922.2-201ENST00000619384 716 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.12□□□□□ -1.91
MEIS3Q99687 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.12□□□□□ -1.91
MEIS3Q99687 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
MEIS3Q99687 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.12□□□□□ -1.91
MEIS3Q99687 GABPAP-201ENST00000419271 1356 ntBASIC3.12□□□□□ -1.91
MEIS3Q99687 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.11□□□□□ -1.91
MEIS3Q99687 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
MEIS3Q99687 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
MEIS3Q99687 RNU6-1188P-201ENST00000363795 107 ntBASIC3.11□□□□□ -1.91
MEIS3Q99687 RNA5SP456-201ENST00000364002 114 ntBASIC3.11□□□□□ -1.91
MEIS3Q99687 Y_RNA.197-201ENST00000364004 102 ntBASIC3.11□□□□□ -1.91
MEIS3Q99687 SNORA16.2-201ENST00000390991 127 ntBASIC3.11□□□□□ -1.91
MEIS3Q99687 CISD1P1-201ENST00000393907 327 ntBASIC3.11□□□□□ -1.91
MEIS3Q99687 MIR450B-201ENST00000401182 78 ntBASIC3.11□□□□□ -1.91
MEIS3Q99687 Y_RNA.646-201ENST00000410980 101 ntBASIC3.11□□□□□ -1.91
MEIS3Q99687 AC099677.1-201ENST00000420575 175 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms