Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 RNU6-220P-201ENST00000390919 107 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.82□□□□□ -2.12
CDX2Q99626 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.82□□□□□ -2.12
CDX2Q99626 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.82□□□□□ -2.12
CDX2Q99626 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.82□□□□□ -2.12
CDX2Q99626 AL353777.1-201ENST00000425552 326 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.82□□□□□ -2.12
CDX2Q99626 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.82□□□□□ -2.12
CDX2Q99626 AL008629.1-201ENST00000438615 184 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 GPM6BP3-201ENST00000442797 145 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 MTND5P2-201ENST00000442927 1142 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 Z83846.1-201ENST00000446798 265 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CDX2Q99626 MTND2P14-201ENST00000482139 351 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.82□□□□□ -2.12
CDX2Q99626 AC105252.1-201ENST00000503089 286 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CDX2Q99626 MTCO3P28-201ENST00000513351 515 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 Y_RNA.688-201ENST00000516565 95 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 AC006199.1-201ENST00000548728 219 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.82□□□□□ -2.12
CDX2Q99626 AC021739.1-201ENST00000559631 174 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.82□□□□□ -2.12
CDX2Q99626 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.82□□□□□ -2.12
CDX2Q99626 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.82□□□□□ -2.12
CDX2Q99626 AC009314.1-201ENST00000603871 304 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 AL031281.1-201ENST00000604049 488 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 AL607023.1-201ENST00000620045 248 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 AC092192.1-201ENST00000633154 1018 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 AC007671.2-201ENST00000637344 619 ntBASIC1.82□□□□□ -2.12
CDX2Q99626 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CDX2Q99626 AL359851.1-201ENST00000569460 4997 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CDX2Q99626 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CDX2Q99626 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CDX2Q99626 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CDX2Q99626 MIR96-201ENST00000362288 78 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 RNU6-37P-201ENST00000362692 107 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 RNU6-11P-201ENST00000364234 107 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 RNU6-512P-201ENST00000364438 103 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 RNU6-53P-201ENST00000365367 106 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 RNU6-1083P-201ENST00000384022 107 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 RNY3P9-201ENST00000384727 106 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 RNU6-817P-201ENST00000391083 104 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CDX2Q99626 RPS20P2-201ENST00000402520 389 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.81□□□□□ -2.12
CDX2Q99626 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.81□□□□□ -2.12
CDX2Q99626 BTF3L4P3-201ENST00000418879 476 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AL365338.1-201ENST00000422282 858 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.81□□□□□ -2.12
CDX2Q99626 MTND5P25-201ENST00000430499 799 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 RPS6P15-201ENST00000431996 751 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 GPM6BP2-201ENST00000432046 144 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 UBE2D3P4-201ENST00000441973 436 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 GPM6BP1-201ENST00000446387 144 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AL031659.1-201ENST00000447075 539 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.81□□□□□ -2.12
CDX2Q99626 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.81□□□□□ -2.12
CDX2Q99626 PSPHP1-201ENST00000450062 261 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.81□□□□□ -2.12
CDX2Q99626 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.81□□□□□ -2.12
CDX2Q99626 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.81□□□□□ -2.12
CDX2Q99626 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.81□□□□□ -2.12
CDX2Q99626 MTND3P7-201ENST00000474435 343 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 GZMAP1-201ENST00000503054 631 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.81□□□□□ -2.12
CDX2Q99626 AC010486.3-201ENST00000511602 785 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AF131216.2-201ENST00000512316 564 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.81□□□□□ -2.12
CDX2Q99626 AC009902.1-201ENST00000519351 183 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AP003461.1-201ENST00000528866 78 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AC084851.1-201ENST00000529105 249 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AL356057.1-201ENST00000533798 831 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.81□□□□□ -2.12
CDX2Q99626 NACAP3-201ENST00000552100 481 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AC007375.1-201ENST00000554513 578 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.81□□□□□ -2.12
CDX2Q99626 MIR3146-201ENST00000580367 79 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 Z99497.2-201ENST00000603634 310 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AP000811.1-201ENST00000603803 651 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AL355598.1-201ENST00000604169 202 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AC091152.3-201ENST00000604227 325 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AC007363.1-201ENST00000604736 620 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AC107214.2-201ENST00000608204 634 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AP002782.1-201ENST00000623107 614 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AC078883.4-201ENST00000623218 367 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 AC007490.1-201ENST00000624321 703 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
CDX2Q99626 AC006026.1-201ENST00000444025 1803 ntBASIC1.81□□□□□ -2.12
CDX2Q99626 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.81□□□□□ -2.12
CDX2Q99626 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CDX2Q99626 NACAP2-201ENST00000318548 624 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 RNU6-660P-201ENST00000364566 109 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 RNU4-52P-201ENST00000384209 138 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 Y_RNA.534-201ENST00000384599 112 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.8□□□□□ -2.12
CDX2Q99626 AL356379.1-201ENST00000414105 126 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms