Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC018437.1-201ENST00000492214 406 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AC104136.1-201ENST00000512969 394 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 Y_RNA.687-201ENST00000516558 91 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AC135279.1-201ENST00000543493 504 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AC079598.5-201ENST00000547460 117 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AC105137.2-201ENST00000569073 466 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 RPS15AP11-201ENST00000594193 385 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AC093788.1-201ENST00000609356 927 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AC091834.1-201ENST00000614543 472 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AC010378.1-201ENST00000619270 362 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 CTSLP2-204ENST00000629029 392 ntBASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.41□□□□□ -2.02
SNRNP40Q96DI7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SNRNP40Q96DI7 RBBP8P1-201ENST00000449447 1844 ntBASIC2.4□□□□□ -2.02
SNRNP40Q96DI7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.4□□□□□ -2.02
SNRNP40Q96DI7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.4□□□□□ -2.02
SNRNP40Q96DI7 RNA5SP125-201ENST00000364843 120 ntBASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 RNU6-45P-201ENST00000384471 107 ntBASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 SNORD116-20-201ENST00000384529 92 ntBASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 CALM1P1-201ENST00000442082 433 ntBASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 RPS3AP17-201ENST00000472594 777 ntBASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 AC090525.1-201ENST00000479116 478 ntBASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 AP004217.1-201ENST00000480579 346 ntBASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 AC074344.1-201ENST00000512823 224 ntBASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 AC090115.4-201ENST00000609970 188 ntBASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 MIR5739-201ENST00000619803 80 ntBASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SNRNP40Q96DI7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 Y_RNA.296-201ENST00000364930 108 ntBASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 HMGN2P35-201ENST00000412164 270 ntBASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 HMGB1P31-201ENST00000437242 427 ntBASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AC132479.1-201ENST00000449160 144 ntBASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 snoU13.15-201ENST00000459407 104 ntBASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AC003982.1-202ENST00000469928 248 ntBASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 MTND3P25-201ENST00000509243 135 ntBASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AC091133.4-201ENST00000511142 308 ntBASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AL133241.1-201ENST00000556832 487 ntBASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 MIR4524B-201ENST00000581569 115 ntBASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AC087683.1-201ENST00000591187 441 ntBASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AC012119.1-201ENST00000603184 222 ntBASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AC021646.1-201ENST00000605469 484 ntBASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AP001486.3-201ENST00000615334 372 ntBASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AC136475.10-201ENST00000620253 385 ntBASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 AC006020.1-201ENST00000420179 1854 ntBASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
SNRNP40Q96DI7 MTND4P14-201ENST00000435799 1354 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 SNORD62.1-201ENST00000362541 86 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 RNU6-1120P-201ENST00000362988 108 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 RNU6-384P-201ENST00000364900 104 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 RNU6-715P-201ENST00000365204 103 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 RNU6-1042P-201ENST00000384204 107 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 RNU6-843P-201ENST00000384454 104 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 RNU6-606P-201ENST00000384721 111 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 MIR592-201ENST00000384959 97 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 AL663109.1-201ENST00000411498 844 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 MTATP6P18-201ENST00000417994 673 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 Z98742.3-201ENST00000418637 326 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 EIF4EP4-201ENST00000424916 578 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 AC073464.1-201ENST00000429823 534 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 MTCO2P11-201ENST00000431069 680 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 CYP2C59P-201ENST00000457790 269 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 Y_RNA.638-201ENST00000459374 113 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 MTND3P5-201ENST00000512798 333 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 RNU1-86P-201ENST00000516108 154 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 RNA5SP282-201ENST00000516355 108 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms