Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 CASC19-280ENST00000642102 1351 ntBASIC3.09□□□□□ -1.92
SH3KBP1Q96B97 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 RNU6-266P-201ENST00000364225 107 ntBASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 SNORA68.1-201ENST00000364537 132 ntBASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 RNU1-140P-201ENST00000365040 165 ntBASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 TOMM20P4-201ENST00000427861 435 ntBASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 RBMX2P4-201ENST00000441256 376 ntBASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 S100A11P2-201ENST00000467589 312 ntBASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 AC018710.1-201ENST00000506509 158 ntBASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 HIGD1AP13-201ENST00000509878 289 ntBASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 RNA5SP217-201ENST00000515959 91 ntBASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 RNA5SP341-201ENST00000516261 117 ntBASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 RPL7P20-201ENST00000520308 745 ntBASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 COX6CP5-201ENST00000527162 228 ntBASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 AC023050.3-201ENST00000541142 333 ntBASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 CTHRC1P1-201ENST00000605383 469 ntBASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 AC135776.4-201ENST00000624300 1904 ntBASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SH3KBP1Q96B97 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 AC138393.1-203ENST00000327086 343 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-37P-201ENST00000362692 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-11P-201ENST00000364234 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-7-201ENST00000364784 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-1280P-201ENST00000365211 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-8-201ENST00000365467 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-25P-201ENST00000383873 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-1-201ENST00000383898 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 Y_RNA.390-201ENST00000383932 102 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 Y_RNA.399-201ENST00000383955 105 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-48P-201ENST00000384161 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-36P-201ENST00000384172 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-4P-201ENST00000384205 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-5P-201ENST00000384238 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-3P-201ENST00000384314 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-16P-201ENST00000384385 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-15P-201ENST00000384534 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-2-201ENST00000384627 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-29P-201ENST00000384637 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-9-201ENST00000384776 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-33P-201ENST00000384793 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 AL162578.1-201ENST00000406202 378 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 AL513475.1-201ENST00000406602 315 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-373P-201ENST00000411247 98 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 AL139281.1-201ENST00000422120 335 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 AC093151.1-201ENST00000427711 313 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RPS15AP7-201ENST00000439294 405 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 HMGN2P10-201ENST00000448085 265 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-1208P-201ENST00000459588 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 HMGN2P26-201ENST00000463169 339 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 AC011005.2-201ENST00000487324 359 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 Y_RNA.654-201ENST00000497848 106 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 AC091885.1-201ENST00000506658 268 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 AC025465.4-201ENST00000513422 638 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 Y_RNA.665-201ENST00000516177 98 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 Y_RNA.687-201ENST00000516558 91 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-358P-201ENST00000516564 75 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 BTF3P12-201ENST00000519620 469 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 GLYCAM1-201ENST00000546596 285 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 AC090115.3-201ENST00000553218 849 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 AP001094.1-201ENST00000579805 193 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 RNU6-6P-201ENST00000606623 107 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 AL449363.1-201ENST00000617815 186 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 AC009033.1-201ENST00000624279 431 ntBASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SH3KBP1Q96B97 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 RNU6-522P-201ENST00000364497 107 ntBASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 MIR34A-201ENST00000385130 110 ntBASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 U3.26-201ENST00000391236 204 ntBASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 AL139413.1-201ENST00000421309 217 ntBASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 SRIP2-201ENST00000428470 166 ntBASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 AC009296.1-201ENST00000443146 155 ntBASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 NDUFB1P2-201ENST00000449477 176 ntBASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 RPL31P58-201ENST00000469001 379 ntBASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 AC117503.1-201ENST00000472241 394 ntBASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 RPL23AP70-201ENST00000483361 460 ntBASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 AC098799.2-201ENST00000509466 868 ntBASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 RPL23AP94-201ENST00000512518 302 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms