Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MIR892C-201ENST00000516410 77 ntBASIC2.81□□□□□ -1.96
SLC44A1Q8WWI5 AC009812.2-201ENST00000517657 457 ntBASIC2.81□□□□□ -1.96
SLC44A1Q8WWI5 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.81□□□□□ -1.96
SLC44A1Q8WWI5 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.81□□□□□ -1.96
SLC44A1Q8WWI5 NACAP3-201ENST00000552100 481 ntBASIC2.81□□□□□ -1.96
SLC44A1Q8WWI5 BNIP3P25-201ENST00000596023 559 ntBASIC2.81□□□□□ -1.96
SLC44A1Q8WWI5 VN1R80P-201ENST00000597126 338 ntBASIC2.81□□□□□ -1.96
SLC44A1Q8WWI5 BNIP3P10-201ENST00000605360 577 ntBASIC2.81□□□□□ -1.96
SLC44A1Q8WWI5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 AC093536.2-201ENST00000565257 1406 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 Y_RNA.72-201ENST00000362894 103 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 SNORD3E-201ENST00000362899 217 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 RNU1-109P-201ENST00000383960 147 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 Y_RNA.530-201ENST00000384587 101 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 MT-TL1-201ENST00000386347 75 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 RNA5SP219-201ENST00000390940 113 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 AL138885.1-201ENST00000405921 675 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 CYCSP33-201ENST00000414485 327 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 AC009161.1-201ENST00000417306 376 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 MTND4LP11-201ENST00000422184 280 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 MTATP6P23-201ENST00000440153 476 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 AL583843.1-201ENST00000456070 346 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 RPS27AP9-201ENST00000477681 438 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 AC018710.1-201ENST00000506509 158 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 AC114786.4-201ENST00000508771 728 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 AC091826.1-201ENST00000514065 313 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 RNU1-86P-201ENST00000516108 154 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 RNU6-1038P-201ENST00000516516 104 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 RNU1-107P-201ENST00000516617 154 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 SNORA20.3-201ENST00000516880 132 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 RNU6-1183P-201ENST00000517054 60 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 RPL7P20-201ENST00000520308 745 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 CYCSP27-201ENST00000527643 293 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 CYCSP39-201ENST00000565821 309 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 MIR4782-201ENST00000577987 79 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 ZNF861P-201ENST00000588126 639 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 AL451007.1-201ENST00000595491 289 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 AC092747.3-201ENST00000603769 301 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 Z82243.1-201ENST00000609432 473 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 AL031601.2-202ENST00000622650 282 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 AC090617.10-201ENST00000624308 134 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 AC110491.1-201ENST00000562191 2010 ntBASIC2.8□□□□□ -1.96
SLC44A1Q8WWI5 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 AC091564.4-201ENST00000533934 2194 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 Y_RNA.86-201ENST00000363020 111 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 Y_RNA.279-201ENST00000364763 95 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 RNU6-384P-201ENST00000364900 104 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 Z98749.2-208ENST00000381646 500 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 RNU6-658P-201ENST00000384606 106 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 MIR592-201ENST00000384959 97 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 EIF4E2P1-201ENST00000393781 255 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 UBA52P6-201ENST00000399822 382 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 RPS4XP7-201ENST00000406274 780 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 Y_RNA.615-201ENST00000410769 117 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 AC138393.2-201ENST00000414742 246 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 USP9YP20-201ENST00000419224 558 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 AL645937.1-202ENST00000421799 937 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 BPY2DP-201ENST00000422208 265 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 AC007560.1-201ENST00000426912 237 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 AC098831.1-201ENST00000440661 216 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 AC007547.1-201ENST00000462177 490 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 AP001486.1-201ENST00000463339 476 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 AC128713.1-201ENST00000471495 306 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 MTCO2P30-201ENST00000503662 364 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 FAM206BP-201ENST00000510179 541 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 SNORA25.17-201ENST00000517184 124 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 AC134698.4-201ENST00000523451 826 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 AC023050.3-201ENST00000541142 333 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 AC022080.3-201ENST00000544433 482 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 U6.99-201ENST00000637524 83 ntBASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SLC44A1Q8WWI5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SLC44A1Q8WWI5 AL365361.1-201ENST00000566942 3481 ntBASIC2.78□□□□□ -1.96
SLC44A1Q8WWI5 SNORD56.5-201ENST00000364281 72 ntBASIC2.78□□□□□ -1.96
SLC44A1Q8WWI5 RNU6-876P-201ENST00000391295 104 ntBASIC2.78□□□□□ -1.96
SLC44A1Q8WWI5 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms