Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 Y_RNA.274-201ENST00000364714 101 ntBASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 RNU6-338P-201ENST00000383888 105 ntBASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 RNU6-662P-201ENST00000384253 104 ntBASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 HSPE1P26-201ENST00000405341 275 ntBASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 RNU4-78P-201ENST00000410940 126 ntBASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 Z92545.1-201ENST00000411782 234 ntBASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 AC127537.2-201ENST00000439258 465 ntBASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 MED28P2-201ENST00000475771 317 ntBASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 RNU6-1092P-201ENST00000516955 87 ntBASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 AC012531.5-201ENST00000611375 151 ntBASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 AC008669.1-201ENST00000565823 2178 ntBASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SH3RF3Q8TEJ3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 RNU6-600P-201ENST00000362524 99 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 RNU6-1159P-201ENST00000362933 107 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 RNU4-42P-201ENST00000364738 142 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 RNU6-387P-201ENST00000411331 105 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 RNU2-71P-201ENST00000411395 189 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 AC005094.1-201ENST00000440420 368 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 AC026801.1-201ENST00000497178 464 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 AC093852.1-201ENST00000503587 266 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 NDUFB4P9-201ENST00000511646 388 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 RNU2-69P-201ENST00000516061 100 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 RNU6-798P-201ENST00000516912 103 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 AC022868.1-201ENST00000517767 391 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 AL133271.1-201ENST00000538229 291 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 AC090517.1-201ENST00000569307 266 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 SNORD84-203ENST00000584275 78 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 AC005899.2-201ENST00000584353 90 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 AC011471.1-201ENST00000585766 187 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 AC010900.2-201ENST00000604508 210 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 U2.17-201ENST00000611454 95 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 AC006329.2-201ENST00000611491 394 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.96□□□□□ -1.78
SH3RF3Q8TEJ3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 GABPAP-201ENST00000419271 1356 ntBASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 Y_RNA.19-201ENST00000362462 99 ntBASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 Y_RNA.29-201ENST00000362570 113 ntBASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 Y_RNA.105-201ENST00000363182 111 ntBASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 Y_RNA.314-201ENST00000365114 102 ntBASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 Y_RNA.416-201ENST00000384014 113 ntBASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 RNU6-125P-201ENST00000384505 107 ntBASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 Y_RNA.551-201ENST00000384661 102 ntBASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 RNA5SP107-201ENST00000411358 122 ntBASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 AC008264.1-201ENST00000447612 367 ntBASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 RPS4XP2-201ENST00000458402 793 ntBASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 RPS29P2-201ENST00000479278 136 ntBASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 RNU5B-3P-201ENST00000516601 115 ntBASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 RNU6-1212P-201ENST00000517023 104 ntBASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 RNU6-323P-201ENST00000521915 107 ntBASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 ZNF192P1-203ENST00000565888 810 ntBASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 MIR5004-201ENST00000579078 107 ntBASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SH3RF3Q8TEJ3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SH3RF3Q8TEJ3 RNU6-989P-201ENST00000362756 107 ntBASIC3.94□□□□□ -1.78
SH3RF3Q8TEJ3 RNY3P11-201ENST00000364153 102 ntBASIC3.94□□□□□ -1.78
SH3RF3Q8TEJ3 RNY1-201ENST00000364228 113 ntBASIC3.94□□□□□ -1.78
SH3RF3Q8TEJ3 Y_RNA.464-201ENST00000384282 110 ntBASIC3.94□□□□□ -1.78
SH3RF3Q8TEJ3 SNORD58.1-201ENST00000391313 66 ntBASIC3.94□□□□□ -1.78
SH3RF3Q8TEJ3 AL138878.1-201ENST00000405131 347 ntBASIC3.94□□□□□ -1.78
SH3RF3Q8TEJ3 RNU2-33P-201ENST00000410344 192 ntBASIC3.94□□□□□ -1.78
SH3RF3Q8TEJ3 RNU6-121P-201ENST00000410525 99 ntBASIC3.94□□□□□ -1.78
SH3RF3Q8TEJ3 AC126124.2-201ENST00000413542 321 ntBASIC3.94□□□□□ -1.78
SH3RF3Q8TEJ3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.94□□□□□ -1.78
SH3RF3Q8TEJ3 RPL21P66-201ENST00000426566 466 ntBASIC3.94□□□□□ -1.78
SH3RF3Q8TEJ3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.94□□□□□ -1.78
SH3RF3Q8TEJ3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.94□□□□□ -1.78
SH3RF3Q8TEJ3 AC006028.1-201ENST00000438379 402 ntBASIC3.94□□□□□ -1.78
SH3RF3Q8TEJ3 HMGN2P7-201ENST00000456186 273 ntBASIC3.94□□□□□ -1.78
SH3RF3Q8TEJ3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.94□□□□□ -1.78
SH3RF3Q8TEJ3 AC096745.1-201ENST00000509945 370 ntBASIC3.94□□□□□ -1.78
SH3RF3Q8TEJ3 AC092436.3-201ENST00000511788 257 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms