Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RNU6-700P-201ENST00000391043 107 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 PRRC2CP1-201ENST00000404428 159 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 FARSBP1-201ENST00000435808 1778 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AC138393.1-203ENST00000327086 343 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 RNA5SP501-201ENST00000410990 112 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 BTF3P8-201ENST00000414577 526 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 MTCO2P20-201ENST00000437339 673 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AL133373.1-201ENST00000497098 94 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 COX7A2P2-201ENST00000505291 250 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 MIR4493-201ENST00000584016 73 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 AL078604.3-201ENST00000615580 211 ntBASIC0.16□□□□□ -2.38
ALMS1Q8TCU4 RNU6-923P-201ENST00000364753 107 ntBASIC0.15□□□□□ -2.38
ALMS1Q8TCU4 MIR604-201ENST00000384880 94 ntBASIC0.15□□□□□ -2.38
ALMS1Q8TCU4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.15□□□□□ -2.38
ALMS1Q8TCU4 UBE2V1P8-201ENST00000437166 265 ntBASIC0.15□□□□□ -2.38
ALMS1Q8TCU4 AL714022.1-201ENST00000439897 151 ntBASIC0.15□□□□□ -2.38
ALMS1Q8TCU4 AL592447.1-201ENST00000447592 540 ntBASIC0.15□□□□□ -2.38
ALMS1Q8TCU4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.15□□□□□ -2.38
ALMS1Q8TCU4 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.15□□□□□ -2.38
ALMS1Q8TCU4 AC116337.2-201ENST00000477662 156 ntBASIC0.15□□□□□ -2.38
ALMS1Q8TCU4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.15□□□□□ -2.38
ALMS1Q8TCU4 RNU5A-7P-201ENST00000515979 116 ntBASIC0.15□□□□□ -2.38
ALMS1Q8TCU4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.15□□□□□ -2.38
ALMS1Q8TCU4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.15□□□□□ -2.38
ALMS1Q8TCU4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.15□□□□□ -2.38
ALMS1Q8TCU4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.15□□□□□ -2.38
ALMS1Q8TCU4 SNORD115-3-201ENST00000363100 82 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 SNORA25-201ENST00000384384 134 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 MIR649-201ENST00000384843 97 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 AC119618.1-201ENST00000434191 222 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 RPL21P47-201ENST00000483696 477 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 AC105224.1-201ENST00000587055 421 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 U4.2-201ENST00000618561 85 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 RNU6-271P-201ENST00000363858 105 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 RNU6-339P-201ENST00000384310 107 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 RNU6-360P-201ENST00000390944 104 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 MIR938-201ENST00000401216 83 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 Z82210.1-201ENST00000440037 231 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 Y_RNA.644-201ENST00000459006 113 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 VPS26AP1-201ENST00000483197 979 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 HMGN1P13-201ENST00000505795 138 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 Y_RNA.659-201ENST00000515994 113 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 AC067904.2-201ENST00000517322 1283 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 AC023158.1-201ENST00000561632 1025 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 AC130454.1-201ENST00000622948 401 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 ZNF663P-202ENST00000641770 1131 ntBASIC0.15□□□□□ -2.39
ALMS1Q8TCU4 Y_RNA.453-201ENST00000384223 109 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 MIR218-1-201ENST00000384999 110 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 MIR518D-201ENST00000385014 87 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 AC027119.1-201ENST00000440877 241 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 MIR4504-201ENST00000577413 92 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 BBIP1P1-201ENST00000602999 279 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 AL391813.1-201ENST00000603098 260 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 AC091965.5-201ENST00000624785 342 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 AL359854.1-201ENST00000614203 1594 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 RNU6-98P-201ENST00000384173 107 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 MIR601-201ENST00000385256 79 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 RNU2-43P-201ENST00000410306 190 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 AC134050.1-201ENST00000495088 933 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 DEFB108D-201ENST00000527787 222 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 AC017083.3-201ENST00000609955 700 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 AC017037.3-201ENST00000625016 472 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 OR5T3-201ENST00000303059 1023 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 U3.9-201ENST00000363823 204 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 VPS26BP1-201ENST00000417155 755 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 MTND4LP10-201ENST00000435146 291 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 ZNF705CP-201ENST00000530515 889 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 AC002545.1-201ENST00000592511 181 ntBASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
ALMS1Q8TCU4 SNORD118-201ENST00000363593 134 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms