Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 USP9YP35-201ENST00000435696 412 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 PTENP1-201ENST00000447117 1215 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 FCF1P6-201ENST00000456841 595 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 RPL37P6-201ENST00000460682 294 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 MTND1P16-201ENST00000465177 898 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 RPL31P58-201ENST00000469001 379 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 RNU6-667P-201ENST00000517186 102 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 AP003033.1-201ENST00000527244 415 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 AL606834.3-201ENST00000602615 496 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 PRR13P7-201ENST00000605538 430 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 AC131235.4-201ENST00000609288 620 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 AC245297.2-201ENST00000610119 565 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 AP000776.1-201ENST00000530032 1663 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 AP000560.1-201ENST00000624150 1937 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 Y_RNA.269-201ENST00000364685 89 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 RNU6-898P-201ENST00000365627 104 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 MIR597-201ENST00000384968 97 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 RN7SKP266-201ENST00000410232 287 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 RNA5SP501-201ENST00000410990 112 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 UBE2V1P4-201ENST00000425374 344 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 AC023194.1-201ENST00000493084 308 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 AC104629.1-201ENST00000494226 508 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 MIR4782-201ENST00000577987 79 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 AC098848.2-201ENST00000588023 330 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 AL358072.1-201ENST00000604156 575 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 RNU6-91P-201ENST00000607774 107 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 AC012360.2-201ENST00000609349 391 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 AC092574.1-201ENST00000609771 420 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 RNU6-1192P-201ENST00000612197 107 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 RNU6-489P-201ENST00000618289 107 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 AC017037.3-201ENST00000625016 472 ntBASIC1.37□□□□□ -2.19
CCDC112Q8NEF3 BTF3L4P2-201ENST00000392798 346 ntBASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 MIR1302-8-201ENST00000408342 128 ntBASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 MIR320C1-201ENST00000408566 88 ntBASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 MIR1285-1-201ENST00000408593 84 ntBASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 AC069282.1-201ENST00000411911 526 ntBASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 MTND5P25-201ENST00000430499 799 ntBASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 NDUFA5P4-201ENST00000436704 385 ntBASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 AC005908.1-201ENST00000468701 347 ntBASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 RPL39P36-201ENST00000490784 156 ntBASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 PSMA3P-201ENST00000555485 635 ntBASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 AC021646.1-201ENST00000605469 484 ntBASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 AC107952.2-201ENST00000606048 486 ntBASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 AC008121.3-201ENST00000618726 433 ntBASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
CCDC112Q8NEF3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 RNU6-413P-201ENST00000384115 107 ntBASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 RNU11-3P-201ENST00000391111 133 ntBASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 MIR1262-201ENST00000408276 93 ntBASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 RPL30P13-201ENST00000418873 348 ntBASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 RPS25P9-201ENST00000435591 252 ntBASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 AC132942.1-201ENST00000486753 483 ntBASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 AC108729.1-201ENST00000487812 947 ntBASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 RNU6-572P-201ENST00000516724 80 ntBASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 AP005660.1-201ENST00000522972 293 ntBASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 AL596327.1-201ENST00000603629 213 ntBASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 AC090970.3-201ENST00000612566 866 ntBASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 AC006386.1-201ENST00000619436 415 ntBASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 TEX21P-201ENST00000447107 1476 ntBASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC112Q8NEF3 AC233981.2-201ENST00000611524 1614 ntBASIC1.34□□□□□ -2.19
CCDC112Q8NEF3 RNU6-701P-201ENST00000384059 107 ntBASIC1.34□□□□□ -2.19
CCDC112Q8NEF3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CCDC112Q8NEF3 AC119751.3-201ENST00000399720 670 ntBASIC1.34□□□□□ -2.19
CCDC112Q8NEF3 ERHP2-201ENST00000402323 299 ntBASIC1.34□□□□□ -2.19
CCDC112Q8NEF3 RNU2-48P-201ENST00000410694 191 ntBASIC1.34□□□□□ -2.19
CCDC112Q8NEF3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC112Q8NEF3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.34□□□□□ -2.19
CCDC112Q8NEF3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.34□□□□□ -2.19
CCDC112Q8NEF3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.34□□□□□ -2.19
CCDC112Q8NEF3 MTCO2P20-201ENST00000437339 673 ntBASIC1.34□□□□□ -2.19
CCDC112Q8NEF3 AC007327.1-201ENST00000447461 264 ntBASIC1.34□□□□□ -2.19
CCDC112Q8NEF3 AC004223.1-201ENST00000479840 271 ntBASIC1.34□□□□□ -2.19
CCDC112Q8NEF3 AC109445.1-201ENST00000512356 383 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms