Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC63Q8NA47 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC63Q8NA47 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC63Q8NA47 AC016691.1-201ENST00000441321 413 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 AL135938.1-201ENST00000443141 297 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 MTND1P1-201ENST00000445453 368 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC63Q8NA47 RNU7-180P-201ENST00000459240 63 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 snoU109.2-201ENST00000459316 135 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 AL163973.1-201ENST00000484753 577 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 AC090096.1-201ENST00000489168 390 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 GZMAP1-201ENST00000503054 631 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 AC019235.1-201ENST00000503847 207 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 RNU6-720P-201ENST00000516363 108 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 MIR892C-201ENST00000516410 77 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 AC079600.2-201ENST00000550076 130 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 HIF1AP1-201ENST00000553642 175 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 AC106782.4-201ENST00000568264 210 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 EIF1P4-201ENST00000572664 335 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC63Q8NA47 AC008121.1-201ENST00000603244 268 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 AL356280.1-201ENST00000603614 379 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC63Q8NA47 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC63Q8NA47 AC099654.12-201ENST00000639868 649 ntBASIC2.5□□□□□ -2.01
CCDC63Q8NA47 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CCDC63Q8NA47 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC63Q8NA47 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC63Q8NA47 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC63Q8NA47 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC63Q8NA47 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 PGBD4P6-201ENST00000421501 610 ntBASIC2.49□□□□□ -2.01
CCDC63Q8NA47 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 CALM1P1-201ENST00000442082 433 ntBASIC2.49□□□□□ -2.01
CCDC63Q8NA47 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 HIGD1AP2-201ENST00000446367 280 ntBASIC2.49□□□□□ -2.01
CCDC63Q8NA47 AL513328.1-201ENST00000446460 224 ntBASIC2.49□□□□□ -2.01
CCDC63Q8NA47 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 AC083798.1-201ENST00000472671 131 ntBASIC2.49□□□□□ -2.01
CCDC63Q8NA47 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 RNU2-69P-201ENST00000516061 100 ntBASIC2.49□□□□□ -2.01
CCDC63Q8NA47 BTF3P12-201ENST00000519620 469 ntBASIC2.49□□□□□ -2.01
CCDC63Q8NA47 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.49□□□□□ -2.01
CCDC63Q8NA47 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 OR5AQ1P-201ENST00000527596 927 ntBASIC2.49□□□□□ -2.01
CCDC63Q8NA47 MTCO3P23-201ENST00000561363 289 ntBASIC2.49□□□□□ -2.01
CCDC63Q8NA47 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 AC007336.1-201ENST00000576365 3828 ntBASIC2.49□□□□□ -2.01
CCDC63Q8NA47 MIR4444-1-201ENST00000581696 74 ntBASIC2.49□□□□□ -2.01
CCDC63Q8NA47 MIR4325-201ENST00000583049 90 ntBASIC2.49□□□□□ -2.01
CCDC63Q8NA47 MIR4444-2-201ENST00000584390 74 ntBASIC2.49□□□□□ -2.01
CCDC63Q8NA47 AC073534.2-201ENST00000620377 381 ntBASIC2.49□□□□□ -2.01
CCDC63Q8NA47 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC63Q8NA47 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC63Q8NA47 ZNF720P1-201ENST00000562403 1939 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC63Q8NA47 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CCDC63Q8NA47 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CCDC63Q8NA47 Y_RNA.3-201ENST00000362331 103 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 Y_RNA.255-201ENST00000364581 97 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 RNU1-51P-201ENST00000365345 176 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 RNU1-52P-201ENST00000384190 164 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 SNORD70.1-201ENST00000391007 85 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC63Q8NA47 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC63Q8NA47 RPL7P54-201ENST00000438336 674 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC63Q8NA47 AL031659.1-201ENST00000447075 539 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 PSPHP1-201ENST00000450062 261 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC63Q8NA47 AC011753.1-201ENST00000451001 220 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC63Q8NA47 SCARNA18-201ENST00000459004 134 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 AP001324.2-201ENST00000461163 319 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 MRPL42P6-201ENST00000486397 371 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 HMGB1P30-201ENST00000492455 606 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC63Q8NA47 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC63Q8NA47 AC096725.1-201ENST00000514266 313 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 Y_RNA.687-201ENST00000516558 91 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 RNU6-835P-201ENST00000516974 104 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 AC109329.2-201ENST00000519658 482 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC63Q8NA47 AL137161.1-201ENST00000532231 390 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.48□□□□□ -2.01
CCDC63Q8NA47 BNIP3P6-201ENST00000549284 499 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms