Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 Y_RNA.324-201ENST00000365165 102 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 RNU6-741P-201ENST00000383889 107 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 RNU6-474P-201ENST00000384243 107 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 RNU6-95P-201ENST00000384697 107 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 AL357075.1-201ENST00000404107 726 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 RNU2-33P-201ENST00000410344 192 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 RPL30P15-201ENST00000457129 321 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 RNU7-152P-201ENST00000458982 64 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 Y_RNA.653-201ENST00000459091 95 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 HMGB1P30-201ENST00000492455 606 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 AC026801.1-201ENST00000497178 464 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 AC096745.1-201ENST00000509945 370 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 AC092436.3-201ENST00000511788 257 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 AC093303.1-201ENST00000514549 295 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 RNU1-86P-201ENST00000516108 154 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 RNU1-107P-201ENST00000516617 154 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 AC100830.2-201ENST00000581636 240 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 AL080274.1-201ENST00000605565 220 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 MTCO1P12-201ENST00000414273 1543 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.9□□□□□ -1.94
CLIP4Q8N3C7 AC093010.3-201ENST00000570269 15214 ntBASIC2.9□□□□□ -1.94
CLIP4Q8N3C7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.9□□□□□ -1.94
CLIP4Q8N3C7 AC007785.2-201ENST00000598627 1916 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 SNORA75B-201ENST00000384053 137 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 MIR559-201ENST00000385188 96 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 MIR325-201ENST00000385260 98 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 MIR548P-201ENST00000408336 84 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 HIGD1AP11-201ENST00000438361 280 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 RPS12P18-201ENST00000442381 270 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 Y_RNA.639-201ENST00000458981 102 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 AC096576.1-201ENST00000489014 359 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 AC116337.1-201ENST00000509680 687 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 MIR892C-201ENST00000516410 77 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 RNU6-1213P-201ENST00000517075 94 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 RNU1-54P-201ENST00000517181 120 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 TRAV28-201ENST00000557548 323 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 MIR3171-201ENST00000584270 74 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 PART1_1.1-201ENST00000611761 217 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 AC027309.3-201ENST00000623419 351 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 U6.105-201ENST00000637379 88 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 AC108206.1-201ENST00000570186 4159 ntBASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CLIP4Q8N3C7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 SNORD3E-201ENST00000362899 217 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 RNU6-593P-201ENST00000364716 112 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 RNU6-692P-201ENST00000384496 107 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 MIR183-201ENST00000384958 110 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 MIR670-201ENST00000390142 98 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 AC007256.1-201ENST00000392253 2765 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 MIR887-201ENST00000401258 79 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 ATG3P1-201ENST00000419507 911 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 AC005300.1-201ENST00000428401 373 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 Z75741.1-201ENST00000446793 314 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 MTCO3P10-201ENST00000455912 772 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 AC139453.3-201ENST00000493276 369 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 MTCYBP40-201ENST00000509390 1135 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 RNU6-1016P-201ENST00000516689 94 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 RNA5SP165-201ENST00000517142 115 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 AC025755.1-201ENST00000521306 278 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 OR1M4P-201ENST00000589199 287 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 ELOCP5-201ENST00000604924 333 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 AC008962.1-201ENST00000605729 304 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 AC244517.12-201ENST00000623581 663 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 CUL1P1-201ENST00000509510 2425 ntBASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms