Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
VPS52Q8N1B4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS52Q8N1B4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS52Q8N1B4 SNORD3E-201ENST00000362899 217 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 RNU6-867P-201ENST00000364956 107 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 Y_RNA.480-201ENST00000384364 102 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 Y_RNA.530-201ENST00000384587 101 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 RNA5SP219-201ENST00000390940 113 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 RNA5SP492-201ENST00000411330 114 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 AC022028.1-201ENST00000412054 408 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 RPL26P27-201ENST00000414397 437 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 CYCSP33-201ENST00000414485 327 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS52Q8N1B4 AC099548.1-201ENST00000421443 426 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 AL139281.1-201ENST00000422120 335 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 SKA2P1-201ENST00000425592 390 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 AC098614.2-201ENST00000426040 255 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 AC105272.1-201ENST00000438604 198 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 RPL23AP58-201ENST00000440453 469 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 MTATP6P7-201ENST00000453315 681 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 RN7SL429P-201ENST00000479090 223 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 RN7SL489P-201ENST00000486185 223 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 AC011005.2-201ENST00000487324 359 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 RN7SL327P-201ENST00000488659 223 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 HMGB1P30-201ENST00000492455 606 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 AC026801.1-201ENST00000497178 464 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 HMGN1P12-201ENST00000499125 195 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 AC079140.5-201ENST00000507882 310 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 SNORA14.1-201ENST00000516113 141 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.19□□□□□ -1.9
VPS52Q8N1B4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS52Q8N1B4 MIR3162-201ENST00000581818 82 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 AC005730.3-201ENST00000583067 366 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 AC011712.1-201ENST00000588959 234 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 AL355598.1-201ENST00000604169 202 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 AL627309.6-201ENST00000606857 840 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 RN7SL853P-201ENST00000617250 223 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 MTND4P35-201ENST00000604257 1375 ntBASIC3.19□□□□□ -1.9
VPS52Q8N1B4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS52Q8N1B4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS52Q8N1B4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS52Q8N1B4 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VPS52Q8N1B4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS52Q8N1B4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS52Q8N1B4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS52Q8N1B4 AC004944.1-201ENST00000517807 3059 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 Y_RNA.166-201ENST00000363730 102 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 U8.9-201ENST00000365667 134 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 RNU6-767P-201ENST00000384132 107 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 RNU6-301P-201ENST00000384277 107 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 RNU6-166P-201ENST00000384371 107 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 RNU6-1179P-201ENST00000384667 107 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 EIF4E2P1-201ENST00000393781 255 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 RN7SKP123-201ENST00000410732 291 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 AL592148.1-201ENST00000413568 445 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 AC114786.4-201ENST00000508771 728 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 AC046134.1-201ENST00000514454 666 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 RNU1-86P-201ENST00000516108 154 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 RNU1-107P-201ENST00000516617 154 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 Y_RNA.702-201ENST00000516843 96 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 SNORA31.19-201ENST00000517079 126 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 SNORA25.17-201ENST00000517184 124 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS52Q8N1B4 BTF3P12-201ENST00000519620 469 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 Z82243.1-201ENST00000609432 473 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 AL031601.2-202ENST00000622650 282 ntBASIC3.18□□□□□ -1.9
VPS52Q8N1B4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VPS52Q8N1B4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS52Q8N1B4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS52Q8N1B4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 CBX3P1-201ENST00000325243 554 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 AC073325.2-201ENST00000339545 159 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 RNU6-845P-201ENST00000362578 103 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 SNORD14B-201ENST00000364533 90 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 RNU6-1303P-201ENST00000364841 107 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 RNU6-384P-201ENST00000364900 104 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 RNA5SP126-201ENST00000365092 109 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 Y_RNA.373-201ENST00000365600 103 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 RNU6-851P-201ENST00000384565 107 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 RPS4XP7-201ENST00000406274 780 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 RNA5SP274-201ENST00000410484 108 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 Y_RNA.623-201ENST00000411128 95 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 AC010099.1-201ENST00000455434 375 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 AC083904.1-201ENST00000487828 231 ntBASIC3.17□□□□□ -1.9
VPS52Q8N1B4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS52Q8N1B4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms