Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 AL645944.1-201ENST00000603857 493 ntBASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 U2.17-201ENST00000611454 95 ntBASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SYNE3Q6ZMZ3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 AC110491.1-201ENST00000562191 2010 ntBASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 RNU6-7-201ENST00000364784 107 ntBASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 RNU6-8-201ENST00000365467 107 ntBASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 AL138827.1-201ENST00000402666 306 ntBASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 AL590004.2-201ENST00000404787 371 ntBASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 COTL1P1-201ENST00000422309 375 ntBASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 PRPS1P1-201ENST00000445305 876 ntBASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 Z96811.1-201ENST00000445880 108 ntBASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 RPL26P9-201ENST00000457466 433 ntBASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 RNU7-66P-201ENST00000459469 62 ntBASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 AC098799.2-201ENST00000509466 868 ntBASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 RNU6-189P-201ENST00000516120 101 ntBASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 MIR892C-201ENST00000516410 77 ntBASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 AC005046.1-201ENST00000608515 625 ntBASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 MIR6134-201ENST00000617606 109 ntBASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 AL365361.1-201ENST00000566942 3481 ntBASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SYNE3Q6ZMZ3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
SYNE3Q6ZMZ3 CDC27P3-201ENST00000635418 1910 ntBASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 Y_RNA.100-201ENST00000363141 102 ntBASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 RNU6-1179P-201ENST00000384667 107 ntBASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 AC107083.1-201ENST00000439643 279 ntBASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 AL583843.1-201ENST00000456070 346 ntBASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 MTCO2P30-201ENST00000503662 364 ntBASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 AC074344.1-201ENST00000512823 224 ntBASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 SNORA31.21-201ENST00000517180 77 ntBASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 AC106782.4-201ENST00000568264 210 ntBASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 ELOCP29-201ENST00000588193 334 ntBASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 VN1R80P-201ENST00000597126 338 ntBASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 U6.42-201ENST00000618440 107 ntBASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SYNE3Q6ZMZ3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 AC091564.4-201ENST00000533934 2194 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 RNU6-799P-201ENST00000363567 107 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 SNORD56.5-201ENST00000364281 72 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 RNU6-332P-201ENST00000391193 108 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 AL356776.1-201ENST00000406574 447 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 RNU4-26P-201ENST00000410270 107 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 GSTA11P-201ENST00000452866 669 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 RPS29P12-201ENST00000460178 152 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 FAM206BP-201ENST00000510179 541 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 SNORA14.1-201ENST00000516113 141 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 RNU6-1069P-201ENST00000516612 133 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 RPL7P20-201ENST00000520308 745 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 CYCSP27-201ENST00000527643 293 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 NACAP3-201ENST00000552100 481 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 LARP7P3-201ENST00000579888 337 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 HMGN2P15-201ENST00000585707 270 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 AC018638.8-201ENST00000588755 281 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 AC023043.3-201ENST00000593113 385 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 AC019159.1-201ENST00000605094 187 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 AC021646.1-201ENST00000605469 484 ntBASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
SYNE3Q6ZMZ3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms