Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 Y_RNA.496-201ENST00000384444 101 ntBASIC3.25□□□□□ -1.89
SHC4Q6S5L8 RNU6-45P-201ENST00000384471 107 ntBASIC3.25□□□□□ -1.89
SHC4Q6S5L8 Y_RNA.534-201ENST00000384599 112 ntBASIC3.25□□□□□ -1.89
SHC4Q6S5L8 MIR548F4-201ENST00000408515 105 ntBASIC3.25□□□□□ -1.89
SHC4Q6S5L8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHC4Q6S5L8 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.25□□□□□ -1.89
SHC4Q6S5L8 AL160004.2-201ENST00000432935 350 ntBASIC3.25□□□□□ -1.89
SHC4Q6S5L8 AL360271.2-201ENST00000447710 161 ntBASIC3.25□□□□□ -1.89
SHC4Q6S5L8 RPL7P42-201ENST00000481005 679 ntBASIC3.25□□□□□ -1.89
SHC4Q6S5L8 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.25□□□□□ -1.89
SHC4Q6S5L8 RNU6-976P-201ENST00000516086 111 ntBASIC3.25□□□□□ -1.89
SHC4Q6S5L8 RNU6-988P-201ENST00000519081 107 ntBASIC3.25□□□□□ -1.89
SHC4Q6S5L8 ERHP1-201ENST00000523006 310 ntBASIC3.25□□□□□ -1.89
SHC4Q6S5L8 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHC4Q6S5L8 OR5D17P-201ENST00000531492 978 ntBASIC3.25□□□□□ -1.89
SHC4Q6S5L8 AL121603.1-201ENST00000553815 142 ntBASIC3.25□□□□□ -1.89
SHC4Q6S5L8 AC012493.2-201ENST00000595083 291 ntBASIC3.25□□□□□ -1.89
SHC4Q6S5L8 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.25□□□□□ -1.89
SHC4Q6S5L8 AC018462.2-201ENST00000605375 395 ntBASIC3.25□□□□□ -1.89
SHC4Q6S5L8 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHC4Q6S5L8 AC002044.1-201ENST00000606707 158 ntBASIC3.25□□□□□ -1.89
SHC4Q6S5L8 AC007485.1-201ENST00000616755 206 ntBASIC3.25□□□□□ -1.89
SHC4Q6S5L8 AC092608.2-201ENST00000624427 218 ntBASIC3.25□□□□□ -1.89
SHC4Q6S5L8 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SHC4Q6S5L8 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.25□□□□□ -1.89
SHC4Q6S5L8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHC4Q6S5L8 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHC4Q6S5L8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SHC4Q6S5L8 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SHC4Q6S5L8 AC073346.2-201ENST00000624724 2058 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHC4Q6S5L8 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHC4Q6S5L8 AC138393.1-203ENST00000327086 343 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 SNORD3E-201ENST00000362899 217 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 SNORA38.1-201ENST00000364172 131 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 RNU6-266P-201ENST00000364225 107 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 SNORA75B-201ENST00000384053 137 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 RNU6-1032P-201ENST00000384100 107 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 MIR512-1-201ENST00000384913 84 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.24□□□□□ -1.89
SHC4Q6S5L8 Y_RNA.594-201ENST00000410373 140 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 BMS1P22-201ENST00000414726 313 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.24□□□□□ -1.89
SHC4Q6S5L8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.24□□□□□ -1.89
SHC4Q6S5L8 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.24□□□□□ -1.89
SHC4Q6S5L8 RPL27AP5-201ENST00000469428 449 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 AC092451.1-201ENST00000480211 153 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 SUMO2P6-201ENST00000505273 288 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 NDUFB4P9-201ENST00000511646 388 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 AC104136.1-201ENST00000512969 394 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 RNA5SP76-201ENST00000516277 87 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.24□□□□□ -1.89
SHC4Q6S5L8 AP004371.1-201ENST00000525240 214 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHC4Q6S5L8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SHC4Q6S5L8 CYCSP27-201ENST00000527643 293 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.24□□□□□ -1.89
SHC4Q6S5L8 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.24□□□□□ -1.89
SHC4Q6S5L8 AC107871.2-201ENST00000612894 502 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 7SK.10-201ENST00000621414 298 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 MIR4275-201ENST00000636486 87 ntBASIC3.24□□□□□ -1.89
SHC4Q6S5L8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SHC4Q6S5L8 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SHC4Q6S5L8 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHC4Q6S5L8 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHC4Q6S5L8 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHC4Q6S5L8 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHC4Q6S5L8 Y_RNA.333-201ENST00000365274 102 ntBASIC3.23□□□□□ -1.89
SHC4Q6S5L8 RNU6-306P-201ENST00000384617 107 ntBASIC3.23□□□□□ -1.89
SHC4Q6S5L8 MIR578-201ENST00000384828 96 ntBASIC3.23□□□□□ -1.89
SHC4Q6S5L8 SNORA48.5-201ENST00000391143 135 ntBASIC3.23□□□□□ -1.89
SHC4Q6S5L8 SNORA75.6-201ENST00000391318 127 ntBASIC3.23□□□□□ -1.89
SHC4Q6S5L8 RNU6-1050P-201ENST00000410388 107 ntBASIC3.23□□□□□ -1.89
SHC4Q6S5L8 RNU2-37P-201ENST00000410695 177 ntBASIC3.23□□□□□ -1.89
SHC4Q6S5L8 AL359672.1-201ENST00000442302 409 ntBASIC3.23□□□□□ -1.89
SHC4Q6S5L8 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.23□□□□□ -1.89
SHC4Q6S5L8 AC003982.1-202ENST00000469928 248 ntBASIC3.23□□□□□ -1.89
SHC4Q6S5L8 AL049830.2-201ENST00000480072 201 ntBASIC3.23□□□□□ -1.89
SHC4Q6S5L8 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.23□□□□□ -1.89
SHC4Q6S5L8 AC092436.3-201ENST00000511788 257 ntBASIC3.23□□□□□ -1.89
SHC4Q6S5L8 RNU6-120P-201ENST00000516077 103 ntBASIC3.23□□□□□ -1.89
SHC4Q6S5L8 RNU6-914P-201ENST00000516749 109 ntBASIC3.23□□□□□ -1.89
SHC4Q6S5L8 Y_RNA.708-201ENST00000516950 96 ntBASIC3.23□□□□□ -1.89
SHC4Q6S5L8 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHC4Q6S5L8 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.23□□□□□ -1.89
SHC4Q6S5L8 AC025423.5-201ENST00000550230 219 ntBASIC3.23□□□□□ -1.89
SHC4Q6S5L8 AL117187.1-201ENST00000555482 181 ntBASIC3.23□□□□□ -1.89
SHC4Q6S5L8 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.23□□□□□ -1.89
SHC4Q6S5L8 ATP5A1P2-202ENST00000616464 443 ntBASIC3.23□□□□□ -1.89
SHC4Q6S5L8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.23□□□□□ -1.89
SHC4Q6S5L8 AC092593.1-201ENST00000515413 1815 ntBASIC3.23□□□□□ -1.89
SHC4Q6S5L8 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SHC4Q6S5L8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.22□□□□□ -1.89
SHC4Q6S5L8 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.22□□□□□ -1.89
SHC4Q6S5L8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHC4Q6S5L8 Y_RNA.252-201ENST00000364556 101 ntBASIC3.22□□□□□ -1.89
SHC4Q6S5L8 RNU6-1074P-201ENST00000383995 104 ntBASIC3.22□□□□□ -1.89
SHC4Q6S5L8 RNU6-985P-201ENST00000410182 104 ntBASIC3.22□□□□□ -1.89
SHC4Q6S5L8 AC080125.1-201ENST00000414888 684 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms