Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RC3H1Q5TC82 AC005005.4-201ENST00000623789 16698 ntBASIC5.32□□□□□ -1.56
RC3H1Q5TC82 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RC3H1Q5TC82 FAM91A3P-201ENST00000456826 2544 ntBASIC5.32□□□□□ -1.56
RC3H1Q5TC82 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RC3H1Q5TC82 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RC3H1Q5TC82 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RC3H1Q5TC82 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RC3H1Q5TC82 AC008568.2-201ENST00000623862 2313 ntBASIC5.31□□□□□ -1.56
RC3H1Q5TC82 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RC3H1Q5TC82 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RC3H1Q5TC82 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RC3H1Q5TC82 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RC3H1Q5TC82 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RC3H1Q5TC82 SNORA20-201ENST00000384662 132 ntBASIC5.31□□□□□ -1.56
RC3H1Q5TC82 MIR32-201ENST00000384965 70 ntBASIC5.31□□□□□ -1.56
RC3H1Q5TC82 MIR10A-201ENST00000385043 110 ntBASIC5.31□□□□□ -1.56
RC3H1Q5TC82 MIR513C-201ENST00000401352 84 ntBASIC5.31□□□□□ -1.56
RC3H1Q5TC82 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.31□□□□□ -1.56
RC3H1Q5TC82 YME1L1P1-201ENST00000429435 297 ntBASIC5.31□□□□□ -1.56
RC3H1Q5TC82 RPL21P13-201ENST00000488305 481 ntBASIC5.31□□□□□ -1.56
RC3H1Q5TC82 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.31□□□□□ -1.56
RC3H1Q5TC82 AC008694.2-201ENST00000517591 306 ntBASIC5.31□□□□□ -1.56
RC3H1Q5TC82 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.31□□□□□ -1.56
RC3H1Q5TC82 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.31□□□□□ -1.56
RC3H1Q5TC82 AC005255.1-201ENST00000593748 216 ntBASIC5.31□□□□□ -1.56
RC3H1Q5TC82 AC006254.2-201ENST00000603259 279 ntBASIC5.31□□□□□ -1.56
RC3H1Q5TC82 AC004825.2-201ENST00000616634 455 ntBASIC5.31□□□□□ -1.56
RC3H1Q5TC82 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.31□□□□□ -1.56
RC3H1Q5TC82 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RC3H1Q5TC82 ZNF204P-201ENST00000416749 2397 ntBASIC5.31□□□□□ -1.56
RC3H1Q5TC82 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RC3H1Q5TC82 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RC3H1Q5TC82 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 SMG1P4-204ENST00000523028 4131 ntBASIC5.3□□□□□ -1.56
RC3H1Q5TC82 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 RNU6-1167P-201ENST00000363227 94 ntBASIC5.3□□□□□ -1.56
RC3H1Q5TC82 RNU6-336P-201ENST00000364891 107 ntBASIC5.3□□□□□ -1.56
RC3H1Q5TC82 RNU4-11P-201ENST00000365287 132 ntBASIC5.3□□□□□ -1.56
RC3H1Q5TC82 RNU6-968P-201ENST00000384076 107 ntBASIC5.3□□□□□ -1.56
RC3H1Q5TC82 MIR153-2-201ENST00000385225 87 ntBASIC5.3□□□□□ -1.56
RC3H1Q5TC82 MIR1250-201ENST00000408098 113 ntBASIC5.3□□□□□ -1.56
RC3H1Q5TC82 AC093578.1-201ENST00000415219 368 ntBASIC5.3□□□□□ -1.56
RC3H1Q5TC82 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 AL353705.4-201ENST00000449661 238 ntBASIC5.3□□□□□ -1.56
RC3H1Q5TC82 RPS29P19-201ENST00000479709 171 ntBASIC5.3□□□□□ -1.56
RC3H1Q5TC82 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 RNU6-844P-201ENST00000517175 102 ntBASIC5.3□□□□□ -1.56
RC3H1Q5TC82 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 AC005296.1-201ENST00000616145 209 ntBASIC5.3□□□□□ -1.56
RC3H1Q5TC82 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 AL596275.2-206ENST00000641957 626 ntBASIC5.3□□□□□ -1.56
RC3H1Q5TC82 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.3□□□□□ -1.56
RC3H1Q5TC82 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.29□□□□□ -1.56
RC3H1Q5TC82 RNU6-275P-201ENST00000364910 107 ntBASIC5.29□□□□□ -1.56
RC3H1Q5TC82 Y_RNA.563-201ENST00000384707 108 ntBASIC5.29□□□□□ -1.56
RC3H1Q5TC82 RNU6-882P-201ENST00000391025 103 ntBASIC5.29□□□□□ -1.56
RC3H1Q5TC82 SNORD66.1-201ENST00000391230 76 ntBASIC5.29□□□□□ -1.56
RC3H1Q5TC82 RNU6-712P-201ENST00000410558 100 ntBASIC5.29□□□□□ -1.56
RC3H1Q5TC82 MTATP6P4-201ENST00000427725 675 ntBASIC5.29□□□□□ -1.56
RC3H1Q5TC82 RPL23AP83-201ENST00000434984 473 ntBASIC5.29□□□□□ -1.56
RC3H1Q5TC82 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 MIR4782-201ENST00000577987 79 ntBASIC5.29□□□□□ -1.56
RC3H1Q5TC82 MIR3613-201ENST00000579844 87 ntBASIC5.29□□□□□ -1.56
RC3H1Q5TC82 AL161798.1-201ENST00000604630 131 ntBASIC5.29□□□□□ -1.56
RC3H1Q5TC82 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RC3H1Q5TC82 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.28□□□□□ -1.56
RC3H1Q5TC82 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms