Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 OR11H5P-201ENST00000554039 926 ntBASIC3.29□□□□□ -1.88
TTC39AQ5SRH9 AC243960.4-201ENST00000600532 288 ntBASIC3.29□□□□□ -1.88
TTC39AQ5SRH9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.29□□□□□ -1.88
TTC39AQ5SRH9 AC012119.1-201ENST00000603184 222 ntBASIC3.29□□□□□ -1.88
TTC39AQ5SRH9 AP002826.1-201ENST00000608835 315 ntBASIC3.29□□□□□ -1.88
TTC39AQ5SRH9 Z82243.1-201ENST00000609432 473 ntBASIC3.29□□□□□ -1.88
TTC39AQ5SRH9 AC034102.8-201ENST00000615146 484 ntBASIC3.29□□□□□ -1.88
TTC39AQ5SRH9 AC090132.2-201ENST00000615881 347 ntBASIC3.29□□□□□ -1.88
TTC39AQ5SRH9 RMST_7.1-201ENST00000621935 268 ntBASIC3.29□□□□□ -1.88
TTC39AQ5SRH9 AL133216.2-202ENST00000634512 349 ntBASIC3.29□□□□□ -1.88
TTC39AQ5SRH9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TTC39AQ5SRH9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.29□□□□□ -1.88
TTC39AQ5SRH9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 MTND5P7-201ENST00000413558 1798 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 Y_RNA.509-201ENST00000384506 99 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 MIR34A-201ENST00000385130 110 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 RPS4XP7-201ENST00000406274 780 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 MTND4P28-201ENST00000426217 387 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 AL669831.1-202ENST00000428504 417 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 GTF2IP13-201ENST00000438487 386 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 PPP1R2P5-201ENST00000457256 603 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 RNU6-273P-201ENST00000516937 96 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 AC105029.1-201ENST00000520250 669 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 AC093027.1-201ENST00000546698 429 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 AC005668.1-201ENST00000571142 476 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 MIR3921-201ENST00000577308 85 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 MIR4795-201ENST00000584182 89 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 MIR4298-201ENST00000584380 73 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 AC005498.1-201ENST00000592125 465 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 AC098826.3-201ENST00000603823 466 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 AL132765.2-201ENST00000610812 351 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 AC009233.1-201ENST00000616477 371 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 AC090617.7-201ENST00000623952 126 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 TPTEP1-208ENST00000636884 213 ntBASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.28□□□□□ -1.88
TTC39AQ5SRH9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 RNU6-1167P-201ENST00000363227 94 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 U3.12-201ENST00000364498 214 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 SNORA4.3-201ENST00000365564 137 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 RNU6-393P-201ENST00000384475 107 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 MIR196B-201ENST00000384852 84 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 AC080125.1-201ENST00000414888 684 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 Z85995.1-201ENST00000415547 335 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 ARL5AP1-201ENST00000418991 388 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 AC007919.1-201ENST00000429380 217 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 DYNLL1P5-201ENST00000467158 270 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 TRBV1-201ENST00000476502 284 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 SUMO2P6-201ENST00000505273 288 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 MIR3942-201ENST00000585264 109 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 RPL12P50-201ENST00000603116 116 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 AC087045.1-201ENST00000605856 382 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 uc_338.5-201ENST00000611839 155 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 Z99571.1-201ENST00000636677 394 ntBASIC3.27□□□□□ -1.89
TTC39AQ5SRH9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 Y_RNA.813-201ENST00000364639 102 ntBASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 CD24P4-201ENST00000382840 243 ntBASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 Y_RNA.414-201ENST00000384011 101 ntBASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 Y_RNA.530-201ENST00000384587 101 ntBASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 Y_RNA.534-201ENST00000384599 112 ntBASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 NDUFB4P7-201ENST00000423198 363 ntBASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 AC087588.1-201ENST00000462203 316 ntBASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 RNU2-69P-201ENST00000516061 100 ntBASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 RNU6-189P-201ENST00000516120 101 ntBASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 SNORA31.26-201ENST00000517250 137 ntBASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 GLYCAM1-201ENST00000546596 285 ntBASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 AL161798.1-201ENST00000604630 131 ntBASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 AL121757.2-201ENST00000611223 313 ntBASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 AL512643.1-201ENST00000635735 524 ntBASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 AC099654.7-201ENST00000635788 2127 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms