Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.08□□□□□ -2.4
LRRK2Q5S007 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.08□□□□□ -2.4
LRRK2Q5S007 RNU6-349P-201ENST00000362402 107 ntBASIC0.08□□□□□ -2.4
LRRK2Q5S007 MIR30A-201ENST00000385092 71 ntBASIC0.08□□□□□ -2.4
LRRK2Q5S007 RNU2-21P-201ENST00000410368 188 ntBASIC0.08□□□□□ -2.4
LRRK2Q5S007 RNU6-272P-201ENST00000411028 104 ntBASIC0.08□□□□□ -2.4
LRRK2Q5S007 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.08□□□□□ -2.4
LRRK2Q5S007 RPL36AP53-201ENST00000432891 316 ntBASIC0.08□□□□□ -2.4
LRRK2Q5S007 AL359385.1-201ENST00000456509 365 ntBASIC0.08□□□□□ -2.4
LRRK2Q5S007 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.08□□□□□ -2.4
LRRK2Q5S007 ACA64.5-201ENST00000516207 127 ntBASIC0.08□□□□□ -2.4
LRRK2Q5S007 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.08□□□□□ -2.4
LRRK2Q5S007 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.08□□□□□ -2.4
LRRK2Q5S007 CYP3A52P-201ENST00000563326 91 ntBASIC0.08□□□□□ -2.4
LRRK2Q5S007 MIR4441-201ENST00000582623 100 ntBASIC0.08□□□□□ -2.4
LRRK2Q5S007 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.08□□□□□ -2.4
LRRK2Q5S007 MIR8074-201ENST00000615081 81 ntBASIC0.08□□□□□ -2.4
LRRK2Q5S007 AL391597.1-201ENST00000618707 694 ntBASIC0.08□□□□□ -2.4
LRRK2Q5S007 AC015726.3-201ENST00000624501 418 ntBASIC0.08□□□□□ -2.4
LRRK2Q5S007 MIR587-201ENST00000384845 96 ntBASIC0.07□□□□□ -2.4
LRRK2Q5S007 MIR605-201ENST00000385078 83 ntBASIC0.07□□□□□ -2.4
LRRK2Q5S007 RNU11-3P-201ENST00000391111 133 ntBASIC0.07□□□□□ -2.4
LRRK2Q5S007 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.07□□□□□ -2.4
LRRK2Q5S007 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.07□□□□□ -2.4
LRRK2Q5S007 RPS15AP5-201ENST00000436276 388 ntBASIC0.07□□□□□ -2.4
LRRK2Q5S007 RNU7-23P-201ENST00000459465 62 ntBASIC0.07□□□□□ -2.4
LRRK2Q5S007 AC002350.1-201ENST00000490759 375 ntBASIC0.07□□□□□ -2.4
LRRK2Q5S007 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
LRRK2Q5S007 AC048346.1-201ENST00000510247 144 ntBASIC0.07□□□□□ -2.4
LRRK2Q5S007 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.07□□□□□ -2.4
LRRK2Q5S007 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.07□□□□□ -2.4
LRRK2Q5S007 AL391834.1-201ENST00000609609 560 ntBASIC0.07□□□□□ -2.4
LRRK2Q5S007 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.07□□□□□ -2.4
LRRK2Q5S007 AL360181.4-201ENST00000621752 134 ntBASIC0.07□□□□□ -2.4
LRRK2Q5S007 MTND4P16-201ENST00000466108 1367 ntBASIC0.07□□□□□ -2.4
LRRK2Q5S007 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.07□□□□□ -2.4
LRRK2Q5S007 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.07□□□□□ -2.4
LRRK2Q5S007 RNA5SP214-201ENST00000363378 118 ntBASIC0.07□□□□□ -2.4
LRRK2Q5S007 MT-TP-201ENST00000387461 68 ntBASIC0.07□□□□□ -2.4
LRRK2Q5S007 RNU4-63P-201ENST00000411313 118 ntBASIC0.07□□□□□ -2.4
LRRK2Q5S007 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.07□□□□□ -2.4
LRRK2Q5S007 AC006548.1-201ENST00000427470 102 ntBASIC0.07□□□□□ -2.4
LRRK2Q5S007 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.07□□□□□ -2.4
LRRK2Q5S007 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.07□□□□□ -2.4
LRRK2Q5S007 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.07□□□□□ -2.4
LRRK2Q5S007 FAM60CP-201ENST00000591086 664 ntBASIC0.07□□□□□ -2.4
LRRK2Q5S007 AL138963.2-201ENST00000605137 226 ntBASIC0.07□□□□□ -2.4
LRRK2Q5S007 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.07□□□□□ -2.4
LRRK2Q5S007 CR381572.1-201ENST00000625098 102 ntBASIC0.07□□□□□ -2.4
LRRK2Q5S007 AC096656.1-201ENST00000623826 1364 ntBASIC0.07□□□□□ -2.4
LRRK2Q5S007 RNU6-968P-201ENST00000384076 107 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 Y_RNA.498-201ENST00000384460 102 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 MIR1250-201ENST00000408098 113 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 TPMTP4-201ENST00000450749 678 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.06□□□□□ -2.4
LRRK2Q5S007 SNORA4.4-201ENST00000515921 135 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.06□□□□□ -2.4
LRRK2Q5S007 AC125611.1-201ENST00000549563 229 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.06□□□□□ -2.4
LRRK2Q5S007 AC105224.1-201ENST00000587055 421 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.06□□□□□ -2.4
LRRK2Q5S007 AC009950.2-201ENST00000636548 183 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 Z99571.1-201ENST00000636677 394 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
LRRK2Q5S007 Y_RNA.490-201ENST00000384413 102 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 RNU2-63P-201ENST00000410792 194 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 RPS24P7-201ENST00000416921 246 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.06□□□□□ -2.4
LRRK2Q5S007 RAP1BP2-201ENST00000478270 544 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 AC010409.1-201ENST00000487382 476 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.06□□□□□ -2.4
LRRK2Q5S007 SCARNA3-201ENST00000517097 143 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 SCARNA16.5-201ENST00000517114 183 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.06□□□□□ -2.4
LRRK2Q5S007 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.06□□□□□ -2.4
LRRK2Q5S007 LARP7P1-201ENST00000605576 316 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 AP000238.1-201ENST00000608759 426 ntBASIC0.06□□□□□ -2.4
LRRK2Q5S007 AC023934.1-201ENST00000574529 2389 ntBASIC0.05□□□□□ -2.4
LRRK2Q5S007 RNU2-36P-201ENST00000410361 191 ntBASIC0.05□□□□□ -2.4
LRRK2Q5S007 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.05□□□□□ -2.4
LRRK2Q5S007 RPL31P3-201ENST00000458430 332 ntBASIC0.05□□□□□ -2.4
LRRK2Q5S007 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.05□□□□□ -2.4
LRRK2Q5S007 AL136520.1-202ENST00000555494 763 ntBASIC0.05□□□□□ -2.4
LRRK2Q5S007 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.05□□□□□ -2.4
LRRK2Q5S007 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.05□□□□□ -2.4
LRRK2Q5S007 AC095031.1-201ENST00000623685 672 ntBASIC0.05□□□□□ -2.4
LRRK2Q5S007 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.05□□□□□ -2.4
LRRK2Q5S007 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.05□□□□□ -2.4
LRRK2Q5S007 SNORD44.1-201ENST00000363202 61 ntBASIC0.05□□□□□ -2.4
LRRK2Q5S007 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
LRRK2Q5S007 RNU6-945P-201ENST00000383947 107 ntBASIC0.05□□□□□ -2.4
LRRK2Q5S007 RNU6-837P-201ENST00000391056 108 ntBASIC0.05□□□□□ -2.4
LRRK2Q5S007 MTCO3P12-201ENST00000416718 547 ntBASIC0.05□□□□□ -2.4
LRRK2Q5S007 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.05□□□□□ -2.4
LRRK2Q5S007 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.05□□□□□ -2.4
LRRK2Q5S007 RNU6-158P-201ENST00000517104 100 ntBASIC0.05□□□□□ -2.4
LRRK2Q5S007 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.05□□□□□ -2.4
LRRK2Q5S007 AC007751.1-201ENST00000529260 376 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms