Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AL353765.1-201ENST00000605514 183 ntBASIC-0.17□□□□□ -2.44
TFF3Q07654 SNORD114-31-201ENST00000363219 75 ntBASIC-0.18□□□□□ -2.44
TFF3Q07654 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.18□□□□□ -2.44
TFF3Q07654 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.18□□□□□ -2.44
TFF3Q07654 MIR95-201ENST00000385072 81 ntBASIC-0.18□□□□□ -2.44
TFF3Q07654 MIR214-201ENST00000385214 110 ntBASIC-0.18□□□□□ -2.44
TFF3Q07654 RNA5SP25-201ENST00000410815 110 ntBASIC-0.18□□□□□ -2.44
TFF3Q07654 PDCL2P1-201ENST00000419302 352 ntBASIC-0.18□□□□□ -2.44
TFF3Q07654 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC-0.18□□□□□ -2.44
TFF3Q07654 AL049874.1-201ENST00000489560 388 ntBASIC-0.18□□□□□ -2.44
TFF3Q07654 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC-0.18□□□□□ -2.44
TFF3Q07654 AC125611.1-201ENST00000549563 229 ntBASIC-0.18□□□□□ -2.44
TFF3Q07654 MIR4431-201ENST00000579990 94 ntBASIC-0.18□□□□□ -2.44
TFF3Q07654 MZT1P2-201ENST00000604387 248 ntBASIC-0.18□□□□□ -2.44
TFF3Q07654 AL356157.2-201ENST00000605122 111 ntBASIC-0.18□□□□□ -2.44
TFF3Q07654 MIR8063-201ENST00000621930 81 ntBASIC-0.18□□□□□ -2.44
TFF3Q07654 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
TFF3Q07654 RNU6-1243P-201ENST00000364028 107 ntBASIC-0.19□□□□□ -2.44
TFF3Q07654 RNU6-302P-201ENST00000365249 107 ntBASIC-0.19□□□□□ -2.44
TFF3Q07654 HMGB1P17-201ENST00000403495 628 ntBASIC-0.19□□□□□ -2.44
TFF3Q07654 AC104651.1-201ENST00000427559 735 ntBASIC-0.19□□□□□ -2.44
TFF3Q07654 AC022493.2-201ENST00000506122 481 ntBASIC-0.19□□□□□ -2.44
TFF3Q07654 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC-0.19□□□□□ -2.44
TFF3Q07654 RNU6-798P-201ENST00000516912 103 ntBASIC-0.19□□□□□ -2.44
TFF3Q07654 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
TFF3Q07654 AC002545.1-201ENST00000592511 181 ntBASIC-0.19□□□□□ -2.44
TFF3Q07654 AC100812.1-201ENST00000607622 580 ntBASIC-0.19□□□□□ -2.44
TFF3Q07654 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC-0.19□□□□□ -2.44
TFF3Q07654 AC092125.1-201ENST00000562568 1995 ntBASIC-0.19□□□□□ -2.44
TFF3Q07654 AC023934.1-201ENST00000574529 2389 ntBASIC-0.2□□□□□ -2.44
TFF3Q07654 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
TFF3Q07654 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
TFF3Q07654 RNU4-45P-201ENST00000365469 141 ntBASIC-0.2□□□□□ -2.44
TFF3Q07654 RNU6-1065P-201ENST00000384513 106 ntBASIC-0.2□□□□□ -2.44
TFF3Q07654 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.2□□□□□ -2.44
TFF3Q07654 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.2□□□□□ -2.44
TFF3Q07654 SNORA8.3-201ENST00000384679 139 ntBASIC-0.2□□□□□ -2.44
TFF3Q07654 RNU2-7P-201ENST00000410794 178 ntBASIC-0.2□□□□□ -2.44
TFF3Q07654 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC-0.2□□□□□ -2.44
TFF3Q07654 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC-0.2□□□□□ -2.44
TFF3Q07654 AC018868.1-201ENST00000491307 315 ntBASIC-0.2□□□□□ -2.44
TFF3Q07654 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
TFF3Q07654 SNORA68.3-201ENST00000515906 83 ntBASIC-0.2□□□□□ -2.44
TFF3Q07654 RNU6-1282P-201ENST00000516735 96 ntBASIC-0.2□□□□□ -2.44
TFF3Q07654 AL512310.8-201ENST00000550183 120 ntBASIC-0.2□□□□□ -2.44
TFF3Q07654 AC010738.1-201ENST00000604970 987 ntBASIC-0.2□□□□□ -2.44
TFF3Q07654 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC-0.2□□□□□ -2.44
TFF3Q07654 AC092106.3-201ENST00000611308 722 ntBASIC-0.2□□□□□ -2.44
TFF3Q07654 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.2□□□□□ -2.44
TFF3Q07654 RNU6-514P-201ENST00000384208 107 ntBASIC-0.21□□□□□ -2.44
TFF3Q07654 SNORA48.1-201ENST00000390879 135 ntBASIC-0.21□□□□□ -2.44
TFF3Q07654 RNU6-712P-201ENST00000410558 100 ntBASIC-0.21□□□□□ -2.44
TFF3Q07654 RPL22P18-201ENST00000417197 377 ntBASIC-0.21□□□□□ -2.44
TFF3Q07654 BPY2DP-201ENST00000422208 265 ntBASIC-0.21□□□□□ -2.44
TFF3Q07654 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC-0.21□□□□□ -2.44
TFF3Q07654 AC084024.2-201ENST00000503480 791 ntBASIC-0.21□□□□□ -2.44
TFF3Q07654 AC006199.1-201ENST00000548728 219 ntBASIC-0.21□□□□□ -2.44
TFF3Q07654 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.21□□□□□ -2.44
TFF3Q07654 MIR4493-201ENST00000584016 73 ntBASIC-0.21□□□□□ -2.44
TFF3Q07654 BNIP3P27-201ENST00000599991 412 ntBASIC-0.21□□□□□ -2.44
TFF3Q07654 FAM157A-202ENST00000615155 405 ntBASIC-0.21□□□□□ -2.44
TFF3Q07654 Pinc.1-201ENST00000616452 154 ntBASIC-0.21□□□□□ -2.44
TFF3Q07654 AC123767.1-202ENST00000620407 817 ntBASIC-0.21□□□□□ -2.44
TFF3Q07654 uc_338.22-201ENST00000622722 187 ntBASIC-0.21□□□□□ -2.44
TFF3Q07654 AC091965.5-201ENST00000624785 342 ntBASIC-0.21□□□□□ -2.44
TFF3Q07654 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC-0.21□□□□□ -2.44
TFF3Q07654 RNU6-486P-201ENST00000363116 107 ntBASIC-0.22□□□□□ -2.44
TFF3Q07654 RNU6-414P-201ENST00000363705 104 ntBASIC-0.22□□□□□ -2.44
TFF3Q07654 RNU4-12P-201ENST00000365233 139 ntBASIC-0.22□□□□□ -2.44
TFF3Q07654 RNU6-339P-201ENST00000384310 107 ntBASIC-0.22□□□□□ -2.44
TFF3Q07654 MIR561-201ENST00000385216 97 ntBASIC-0.22□□□□□ -2.44
TFF3Q07654 RNU11-3P-201ENST00000391111 133 ntBASIC-0.22□□□□□ -2.44
TFF3Q07654 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC-0.22□□□□□ -2.44
TFF3Q07654 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.22□□□□□ -2.44
TFF3Q07654 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.22□□□□□ -2.44
TFF3Q07654 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.22□□□□□ -2.44
TFF3Q07654 POC1B-211ENST00000549504 581 ntTSL 5 BASIC-0.22□□□□□ -2.44
TFF3Q07654 AP001180.6-201ENST00000584918 159 ntBASIC-0.22□□□□□ -2.44
TFF3Q07654 AL158032.1-201ENST00000605401 106 ntBASIC-0.22□□□□□ -2.44
TFF3Q07654 AC126177.8-201ENST00000618339 1015 ntBASIC-0.22□□□□□ -2.44
TFF3Q07654 MIR5739-201ENST00000619803 80 ntBASIC-0.22□□□□□ -2.44
TFF3Q07654 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.23□□□□□ -2.45
TFF3Q07654 SNORA32.1-201ENST00000364514 115 ntBASIC-0.23□□□□□ -2.45
TFF3Q07654 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.23□□□□□ -2.45
TFF3Q07654 AL160275.3-201ENST00000423876 471 ntBASIC-0.23□□□□□ -2.45
TFF3Q07654 RPS15AP5-201ENST00000436276 388 ntBASIC-0.23□□□□□ -2.45
TFF3Q07654 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC-0.23□□□□□ -2.45
TFF3Q07654 RNU6-758P-201ENST00000516292 89 ntBASIC-0.23□□□□□ -2.45
TFF3Q07654 SNORA31.17-201ENST00000516953 127 ntBASIC-0.23□□□□□ -2.45
TFF3Q07654 AP003392.2-201ENST00000527269 208 ntBASIC-0.23□□□□□ -2.45
TFF3Q07654 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC-0.23□□□□□ -2.45
TFF3Q07654 EIF1P4-201ENST00000572664 335 ntBASIC-0.23□□□□□ -2.45
TFF3Q07654 MIR4645-201ENST00000583158 77 ntBASIC-0.23□□□□□ -2.45
TFF3Q07654 AC008498.1-201ENST00000613012 531 ntBASIC-0.23□□□□□ -2.45
TFF3Q07654 uc_338.34-201ENST00000617467 174 ntBASIC-0.23□□□□□ -2.45
TFF3Q07654 RNA5SP98-201ENST00000363158 137 ntBASIC-0.24□□□□□ -2.45
TFF3Q07654 CALM2P3-201ENST00000400429 449 ntBASIC-0.24□□□□□ -2.45
TFF3Q07654 AL590556.1-201ENST00000423231 483 ntBASIC-0.24□□□□□ -2.45
TFF3Q07654 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC-0.24□□□□□ -2.45
TFF3Q07654 AC132479.1-201ENST00000449160 144 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms