Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.46□□□□□ -2.34
SSBP1Q04837 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.46□□□□□ -2.34
SSBP1Q04837 MZT1P2-201ENST00000604387 248 ntBASIC0.46□□□□□ -2.34
SSBP1Q04837 AC093788.1-201ENST00000609356 927 ntBASIC0.46□□□□□ -2.34
SSBP1Q04837 AL021879.1-201ENST00000611756 288 ntBASIC0.46□□□□□ -2.34
SSBP1Q04837 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.46□□□□□ -2.34
SSBP1Q04837 MIR1322-201ENST00000638013 71 ntBASIC0.46□□□□□ -2.34
SSBP1Q04837 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.46□□□□□ -2.34
SSBP1Q04837 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.46□□□□□ -2.34
SSBP1Q04837 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
SSBP1Q04837 SNRPEP3-201ENST00000338402 276 ntBASIC0.45□□□□□ -2.34
SSBP1Q04837 RNU6-343P-201ENST00000364709 104 ntBASIC0.45□□□□□ -2.34
SSBP1Q04837 MIR548B-201ENST00000385247 97 ntBASIC0.45□□□□□ -2.34
SSBP1Q04837 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
SSBP1Q04837 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.45□□□□□ -2.34
SSBP1Q04837 AC083875.1-201ENST00000419509 405 ntBASIC0.45□□□□□ -2.34
SSBP1Q04837 MTCO2P5-201ENST00000422621 426 ntBASIC0.45□□□□□ -2.34
SSBP1Q04837 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.45□□□□□ -2.34
SSBP1Q04837 AL121578.1-201ENST00000428051 892 ntBASIC0.45□□□□□ -2.34
SSBP1Q04837 GTF2IP3-201ENST00000433887 494 ntBASIC0.45□□□□□ -2.34
SSBP1Q04837 AC007000.2-201ENST00000442564 487 ntBASIC0.45□□□□□ -2.34
SSBP1Q04837 KATNBL1P3-201ENST00000443475 909 ntBASIC0.45□□□□□ -2.34
SSBP1Q04837 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.45□□□□□ -2.34
SSBP1Q04837 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.45□□□□□ -2.34
SSBP1Q04837 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.45□□□□□ -2.34
SSBP1Q04837 MTCYBP40-201ENST00000509390 1135 ntBASIC0.45□□□□□ -2.34
SSBP1Q04837 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.45□□□□□ -2.34
SSBP1Q04837 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.45□□□□□ -2.34
SSBP1Q04837 AP003484.1-201ENST00000530974 250 ntBASIC0.45□□□□□ -2.34
SSBP1Q04837 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.45□□□□□ -2.34
SSBP1Q04837 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.45□□□□□ -2.34
SSBP1Q04837 AL512310.8-201ENST00000550183 120 ntBASIC0.45□□□□□ -2.34
SSBP1Q04837 AC015688.6-201ENST00000577737 104 ntBASIC0.45□□□□□ -2.34
SSBP1Q04837 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.45□□□□□ -2.34
SSBP1Q04837 AL391646.1-201ENST00000603860 190 ntBASIC0.45□□□□□ -2.34
SSBP1Q04837 AL022345.2-201ENST00000606307 135 ntBASIC0.45□□□□□ -2.34
SSBP1Q04837 uc_338.17-201ENST00000619633 179 ntBASIC0.45□□□□□ -2.34
SSBP1Q04837 OR4G3P-201ENST00000633500 913 ntBASIC0.45□□□□□ -2.34
SSBP1Q04837 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.45□□□□□ -2.34
SSBP1Q04837 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
SSBP1Q04837 MIR373-201ENST00000362273 69 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 SNORD114-6-201ENST00000364393 72 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.44□□□□□ -2.34
SSBP1Q04837 SNORA18.2-201ENST00000383865 132 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 RNU6-114P-201ENST00000384704 105 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 RNU6-1300P-201ENST00000391046 108 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 USP9YP33-201ENST00000412220 421 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 AC138623.1-201ENST00000418060 216 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 AL589872.1-201ENST00000426602 288 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 AL591043.1-201ENST00000432461 424 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 CALM1P1-201ENST00000442082 433 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 RNFT1P2-201ENST00000443064 757 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 AC104058.1-201ENST00000448028 297 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 AC132479.1-201ENST00000449160 144 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SSBP1Q04837 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.44□□□□□ -2.34
SSBP1Q04837 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.44□□□□□ -2.34
SSBP1Q04837 AC096772.1-201ENST00000609146 564 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 AC090970.3-201ENST00000612566 866 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 AC040896.1-201ENST00000613819 479 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 AC018926.1-201ENST00000616335 435 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 AC009268.2-201ENST00000621925 457 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 AC120349.3-201ENST00000624377 529 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 FARSBP1-201ENST00000435808 1778 ntBASIC0.44□□□□□ -2.34
SSBP1Q04837 Y_RNA.327-201ENST00000365201 102 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.43□□□□□ -2.34
SSBP1Q04837 RNU2-64P-201ENST00000411315 191 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 AL161935.2-201ENST00000414627 60 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.43□□□□□ -2.34
SSBP1Q04837 RPL21P111-201ENST00000418453 477 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 C8orf59P1-201ENST00000429930 303 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.43□□□□□ -2.34
SSBP1Q04837 AL121890.1-201ENST00000435457 205 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 HSPE1P9-201ENST00000440046 311 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 MTCO3P45-201ENST00000443036 613 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 AL157398.1-201ENST00000452981 186 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.43□□□□□ -2.34
SSBP1Q04837 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.43□□□□□ -2.34
SSBP1Q04837 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.43□□□□□ -2.34
SSBP1Q04837 AC008837.2-201ENST00000513076 418 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 RNU6-197P-201ENST00000516680 100 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 CYCSP23-201ENST00000519781 313 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 TRAV32-201ENST00000553993 340 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.43□□□□□ -2.34
SSBP1Q04837 MIR5094-201ENST00000578766 85 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 MTCO2P2-201ENST00000591258 225 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 VN1R80P-201ENST00000597126 338 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 BNIP3P10-201ENST00000605360 577 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 AC112220.2-201ENST00000605513 533 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 AL365204.3-201ENST00000612448 685 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.43□□□□□ -2.34
SSBP1Q04837 AC130454.1-201ENST00000622948 401 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 MIR1248-201ENST00000629190 106 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 MTND4P16-201ENST00000466108 1367 ntBASIC0.43□□□□□ -2.34
SSBP1Q04837 RNU6-1065P-201ENST00000384513 106 ntBASIC0.42□□□□□ -2.34
SSBP1Q04837 RNU6-160P-201ENST00000384591 107 ntBASIC0.42□□□□□ -2.34
SSBP1Q04837 MIR508-201ENST00000384857 115 ntBASIC0.42□□□□□ -2.34
SSBP1Q04837 FTH1P15-201ENST00000406984 280 ntBASIC0.42□□□□□ -2.34
SSBP1Q04837 HMGN1P14-201ENST00000412459 517 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms