Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 Y_RNA.197-201ENST00000364004 102 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 RNU6-166P-201ENST00000384371 107 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 RNU6-140P-201ENST00000384566 108 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 Y_RNA.646-201ENST00000410980 101 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 RNU6-293P-201ENST00000411259 106 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.3□□□□□ -1.88
E2F1Q01094 RPS15AP6-201ENST00000420703 385 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.3□□□□□ -1.88
E2F1Q01094 Z82205.1-201ENST00000428456 297 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 AC092573.2-201ENST00000434546 243 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 HMGN2P16-201ENST00000456802 261 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.3□□□□□ -1.88
E2F1Q01094 RNU7-187P-201ENST00000458985 68 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
E2F1Q01094 Y_RNA.708-201ENST00000516950 96 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 AC104576.1-201ENST00000524225 88 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 ELOCP31-201ENST00000540463 467 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.3□□□□□ -1.88
E2F1Q01094 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.3□□□□□ -1.88
E2F1Q01094 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.3□□□□□ -1.88
E2F1Q01094 LARP7P3-201ENST00000579888 337 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.3□□□□□ -1.88
E2F1Q01094 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.3□□□□□ -1.88
E2F1Q01094 AL645944.1-201ENST00000603857 493 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
E2F1Q01094 PART1_1.1-201ENST00000611761 217 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 AC133104.2-201ENST00000615272 193 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.3□□□□□ -1.88
E2F1Q01094 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
E2F1Q01094 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
E2F1Q01094 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
E2F1Q01094 MTND5P19-201ENST00000424872 1794 ntBASIC3.3□□□□□ -1.88
E2F1Q01094 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
E2F1Q01094 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
E2F1Q01094 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
E2F1Q01094 AL035425.3-201ENST00000564206 4996 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
E2F1Q01094 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
E2F1Q01094 AC091152.2-201ENST00000591628 2569 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 AC022336.2-201ENST00000568966 2538 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
E2F1Q01094 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.29□□□□□ -1.88
E2F1Q01094 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.29□□□□□ -1.88
E2F1Q01094 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
E2F1Q01094 RNA5SP374-201ENST00000362939 125 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 Y_RNA.162-201ENST00000363683 102 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 RNU6-217P-201ENST00000384164 104 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 RNU6-692P-201ENST00000384496 107 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 RNU6-306P-201ENST00000384617 107 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 MIR559-201ENST00000385188 96 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
E2F1Q01094 AL445529.1-201ENST00000398713 389 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 Y_RNA.594-201ENST00000410373 140 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 RNU6-1050P-201ENST00000410388 107 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 AL096701.2-201ENST00000416920 238 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 AC098614.2-201ENST00000426040 255 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 AC006989.1-201ENST00000427212 131 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.29□□□□□ -1.88
E2F1Q01094 HMGB1P12-201ENST00000438594 598 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.29□□□□□ -1.88
E2F1Q01094 SNORD5.1-201ENST00000458800 75 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 RPS23P3-201ENST00000470993 430 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 RPS4XP13-201ENST00000483219 789 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.29□□□□□ -1.88
E2F1Q01094 Y_RNA.670-201ENST00000516255 105 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 Y_RNA.711-201ENST00000516993 102 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
E2F1Q01094 NDUFB9P3-201ENST00000521269 501 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.29□□□□□ -1.88
E2F1Q01094 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.29□□□□□ -1.88
E2F1Q01094 AC009229.3-201ENST00000608056 282 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.29□□□□□ -1.88
E2F1Q01094 Z69720.2-201ENST00000624755 279 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 AC007256.1-201ENST00000392253 2765 ntBASIC3.29□□□□□ -1.88
E2F1Q01094 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.28□□□□□ -1.88
E2F1Q01094 FTLP6-201ENST00000355274 422 ntBASIC3.28□□□□□ -1.88
E2F1Q01094 Y_RNA.445-201ENST00000384168 102 ntBASIC3.28□□□□□ -1.88
E2F1Q01094 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
E2F1Q01094 Z99755.1-201ENST00000414048 380 ntBASIC3.28□□□□□ -1.88
E2F1Q01094 COTL1P1-201ENST00000422309 375 ntBASIC3.28□□□□□ -1.88
E2F1Q01094 AC007560.1-201ENST00000426912 237 ntBASIC3.28□□□□□ -1.88
E2F1Q01094 SETP5-201ENST00000437270 562 ntBASIC3.28□□□□□ -1.88
E2F1Q01094 AL078601.1-201ENST00000444542 271 ntBASIC3.28□□□□□ -1.88
E2F1Q01094 AC092798.1-201ENST00000458542 409 ntBASIC3.28□□□□□ -1.88
E2F1Q01094 AC097473.1-201ENST00000508142 408 ntBASIC3.28□□□□□ -1.88
E2F1Q01094 RNU6-572P-201ENST00000516724 80 ntBASIC3.28□□□□□ -1.88
E2F1Q01094 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
E2F1Q01094 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.28□□□□□ -1.88
E2F1Q01094 PISRT1.1-201ENST00000616930 107 ntBASIC3.28□□□□□ -1.88
E2F1Q01094 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.28□□□□□ -1.88
E2F1Q01094 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
E2F1Q01094 AC007656.2-201ENST00000624902 4547 ntBASIC3.27□□□□□ -1.89
E2F1Q01094 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.27□□□□□ -1.89
E2F1Q01094 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
E2F1Q01094 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.27□□□□□ -1.89
E2F1Q01094 Y_RNA.404-201ENST00000383978 102 ntBASIC3.27□□□□□ -1.89
E2F1Q01094 Y_RNA.473-201ENST00000384333 102 ntBASIC3.27□□□□□ -1.89
E2F1Q01094 MIR10A-201ENST00000385043 110 ntBASIC3.27□□□□□ -1.89
E2F1Q01094 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms