Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 SUMO2P5-201ENST00000506790 245 ntBASIC0.98□□□□□ -2.25
CCL20P78556 MTCYBP40-201ENST00000509390 1135 ntBASIC0.98□□□□□ -2.25
CCL20P78556 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC0.98□□□□□ -2.25
CCL20P78556 RNU6-991P-201ENST00000516168 107 ntBASIC0.98□□□□□ -2.25
CCL20P78556 RNU6-914P-201ENST00000516749 109 ntBASIC0.98□□□□□ -2.25
CCL20P78556 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.98□□□□□ -2.25
CCL20P78556 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CCL20P78556 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.98□□□□□ -2.25
CCL20P78556 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.98□□□□□ -2.25
CCL20P78556 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.98□□□□□ -2.25
CCL20P78556 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.98□□□□□ -2.25
CCL20P78556 AC023813.2-201ENST00000564321 469 ntBASIC0.98□□□□□ -2.25
CCL20P78556 MIR3683-201ENST00000580847 82 ntBASIC0.98□□□□□ -2.25
CCL20P78556 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.98□□□□□ -2.25
CCL20P78556 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC0.98□□□□□ -2.25
CCL20P78556 AC022893.3-201ENST00000607665 437 ntBASIC0.98□□□□□ -2.25
CCL20P78556 AC097468.3-201ENST00000607956 456 ntBASIC0.98□□□□□ -2.25
CCL20P78556 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
CCL20P78556 ZNF29P-201ENST00000225587 168 ntBASIC0.97□□□□□ -2.25
CCL20P78556 RNU6-622P-201ENST00000384272 103 ntBASIC0.97□□□□□ -2.25
CCL20P78556 MIR29B2-201ENST00000385055 81 ntBASIC0.97□□□□□ -2.25
CCL20P78556 U8.13-201ENST00000390842 128 ntBASIC0.97□□□□□ -2.25
CCL20P78556 MIR1285-1-201ENST00000408593 84 ntBASIC0.97□□□□□ -2.25
CCL20P78556 AL035407.1-201ENST00000429211 571 ntBASIC0.97□□□□□ -2.25
CCL20P78556 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.97□□□□□ -2.25
CCL20P78556 DUXAP8-207ENST00000456786 622 ntBASIC0.97□□□□□ -2.25
CCL20P78556 RNU1-123P-201ENST00000458950 160 ntBASIC0.97□□□□□ -2.25
CCL20P78556 RPL30P6-201ENST00000475925 342 ntBASIC0.97□□□□□ -2.25
CCL20P78556 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.97□□□□□ -2.25
CCL20P78556 AC079395.1-201ENST00000510981 262 ntBASIC0.97□□□□□ -2.25
CCL20P78556 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
CCL20P78556 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.97□□□□□ -2.25
CCL20P78556 MIR1273C-201ENST00000578669 77 ntBASIC0.97□□□□□ -2.25
CCL20P78556 MIR4672-201ENST00000583126 81 ntBASIC0.97□□□□□ -2.25
CCL20P78556 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CCL20P78556 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.97□□□□□ -2.25
CCL20P78556 AC130324.3-201ENST00000614165 542 ntBASIC0.97□□□□□ -2.25
CCL20P78556 AP000943.4-201ENST00000622912 357 ntBASIC0.97□□□□□ -2.25
CCL20P78556 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
CCL20P78556 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CCL20P78556 RNU6-942P-201ENST00000363002 107 ntBASIC0.96□□□□□ -2.26
CCL20P78556 RNU6-271P-201ENST00000363858 105 ntBASIC0.96□□□□□ -2.26
CCL20P78556 RNU6-395P-201ENST00000365662 106 ntBASIC0.96□□□□□ -2.26
CCL20P78556 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.96□□□□□ -2.26
CCL20P78556 SNORA75B-201ENST00000384053 137 ntBASIC0.96□□□□□ -2.26
CCL20P78556 RNU2-23P-201ENST00000410545 195 ntBASIC0.96□□□□□ -2.26
CCL20P78556 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.96□□□□□ -2.26
CCL20P78556 HMGB1P31-201ENST00000437242 427 ntBASIC0.96□□□□□ -2.26
CCL20P78556 AL117351.1-201ENST00000438864 766 ntBASIC0.96□□□□□ -2.26
CCL20P78556 AL353752.1-201ENST00000454946 260 ntBASIC0.96□□□□□ -2.26
CCL20P78556 AL139824.2-201ENST00000458731 1095 ntBASIC0.96□□□□□ -2.26
CCL20P78556 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.96□□□□□ -2.26
CCL20P78556 AC021146.8-201ENST00000507455 733 ntBASIC0.96□□□□□ -2.26
CCL20P78556 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.96□□□□□ -2.26
CCL20P78556 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.96□□□□□ -2.26
CCL20P78556 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.96□□□□□ -2.26
CCL20P78556 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.96□□□□□ -2.26
CCL20P78556 AC109445.1-201ENST00000512356 383 ntBASIC0.96□□□□□ -2.26
CCL20P78556 RNA5SP216-201ENST00000516111 123 ntBASIC0.96□□□□□ -2.26
CCL20P78556 RNU6-677P-201ENST00000516914 101 ntBASIC0.96□□□□□ -2.26
CCL20P78556 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.96□□□□□ -2.26
CCL20P78556 AC009712.1-201ENST00000564938 316 ntBASIC0.96□□□□□ -2.26
CCL20P78556 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.96□□□□□ -2.26
CCL20P78556 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.96□□□□□ -2.26
CCL20P78556 AC078795.2-201ENST00000602835 1252 ntBASIC0.96□□□□□ -2.26
CCL20P78556 AL596327.1-201ENST00000603629 213 ntBASIC0.96□□□□□ -2.26
CCL20P78556 AL645939.4-201ENST00000604495 135 ntBASIC0.96□□□□□ -2.26
CCL20P78556 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.96□□□□□ -2.26
CCL20P78556 AL365204.3-201ENST00000612448 685 ntBASIC0.96□□□□□ -2.26
CCL20P78556 MIR6845-201ENST00000613182 61 ntBASIC0.96□□□□□ -2.26
CCL20P78556 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
CCL20P78556 AC126544.2-201ENST00000625174 749 ntBASIC0.96□□□□□ -2.26
CCL20P78556 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.96□□□□□ -2.26
CCL20P78556 AC245060.5-201ENST00000610778 3293 ntBASIC0.95□□□□□ -2.26
CCL20P78556 snoU2_19.1-201ENST00000362361 80 ntBASIC0.95□□□□□ -2.26
CCL20P78556 RNU6-462P-201ENST00000362659 105 ntBASIC0.95□□□□□ -2.26
CCL20P78556 RNA5SP493-201ENST00000364115 91 ntBASIC0.95□□□□□ -2.26
CCL20P78556 SNORA62.1-201ENST00000364287 154 ntBASIC0.95□□□□□ -2.26
CCL20P78556 SMIM11P1-201ENST00000369586 178 ntBASIC0.95□□□□□ -2.26
CCL20P78556 RNU6-160P-201ENST00000384591 107 ntBASIC0.95□□□□□ -2.26
CCL20P78556 MIR483-201ENST00000385070 76 ntBASIC0.95□□□□□ -2.26
CCL20P78556 MIR1305-201ENST00000408300 86 ntBASIC0.95□□□□□ -2.26
CCL20P78556 RNU6-174P-201ENST00000410406 106 ntBASIC0.95□□□□□ -2.26
CCL20P78556 RNA5SP508-201ENST00000411327 119 ntBASIC0.95□□□□□ -2.26
CCL20P78556 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.95□□□□□ -2.26
CCL20P78556 AL365338.1-201ENST00000422282 858 ntBASIC0.95□□□□□ -2.26
CCL20P78556 TIMM9P1-201ENST00000436122 256 ntBASIC0.95□□□□□ -2.26
CCL20P78556 MTCO1P44-201ENST00000441935 243 ntBASIC0.95□□□□□ -2.26
CCL20P78556 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC0.95□□□□□ -2.26
CCL20P78556 AC245517.4-201ENST00000448601 281 ntBASIC0.95□□□□□ -2.26
CCL20P78556 AC093899.1-201ENST00000457984 376 ntBASIC0.95□□□□□ -2.26
CCL20P78556 snoU109.2-201ENST00000459316 135 ntBASIC0.95□□□□□ -2.26
CCL20P78556 snoU13.14-201ENST00000459372 104 ntBASIC0.95□□□□□ -2.26
CCL20P78556 AC004223.1-201ENST00000479840 271 ntBASIC0.95□□□□□ -2.26
CCL20P78556 AP001025.1-201ENST00000486139 332 ntBASIC0.95□□□□□ -2.26
CCL20P78556 RNA5SP445-201ENST00000515889 115 ntBASIC0.95□□□□□ -2.26
CCL20P78556 CR383656.8-201ENST00000549046 145 ntBASIC0.95□□□□□ -2.26
CCL20P78556 AC123912.5-201ENST00000605470 343 ntBASIC0.95□□□□□ -2.26
CCL20P78556 AC130454.1-201ENST00000622948 401 ntBASIC0.95□□□□□ -2.26
CCL20P78556 MIR1248-201ENST00000629190 106 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms