Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL158032.1-201ENST00000605401 106 ntBASIC1.77□□□□□ -2.13
VSX2P58304 AL670379.9-201ENST00000605428 253 ntBASIC1.77□□□□□ -2.13
VSX2P58304 NDUFA8P1-201ENST00000605525 367 ntBASIC1.77□□□□□ -2.13
VSX2P58304 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.77□□□□□ -2.13
VSX2P58304 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.77□□□□□ -2.13
VSX2P58304 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
VSX2P58304 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.77□□□□□ -2.13
VSX2P58304 RNU5E-1-201ENST00000362477 120 ntBASIC1.76□□□□□ -2.13
VSX2P58304 RNU6-190P-201ENST00000384154 102 ntBASIC1.76□□□□□ -2.13
VSX2P58304 EIF4EP4-201ENST00000424916 578 ntBASIC1.76□□□□□ -2.13
VSX2P58304 AL356583.2-201ENST00000426536 280 ntBASIC1.76□□□□□ -2.13
VSX2P58304 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.76□□□□□ -2.13
VSX2P58304 AC124916.1-201ENST00000444020 547 ntBASIC1.76□□□□□ -2.13
VSX2P58304 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
VSX2P58304 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.76□□□□□ -2.13
VSX2P58304 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.76□□□□□ -2.13
VSX2P58304 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.76□□□□□ -2.13
VSX2P58304 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.76□□□□□ -2.13
VSX2P58304 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.76□□□□□ -2.13
VSX2P58304 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
VSX2P58304 RNU6-991P-201ENST00000516168 107 ntBASIC1.76□□□□□ -2.13
VSX2P58304 RNU2-44P-201ENST00000516795 194 ntBASIC1.76□□□□□ -2.13
VSX2P58304 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.76□□□□□ -2.13
VSX2P58304 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.76□□□□□ -2.13
VSX2P58304 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.76□□□□□ -2.13
VSX2P58304 AC025165.5-201ENST00000602802 578 ntBASIC1.76□□□□□ -2.13
VSX2P58304 AL109918.3-201ENST00000603072 338 ntBASIC1.76□□□□□ -2.13
VSX2P58304 AL713866.2-201ENST00000603579 219 ntBASIC1.76□□□□□ -2.13
VSX2P58304 AC012493.3-201ENST00000604494 112 ntBASIC1.76□□□□□ -2.13
VSX2P58304 AC068276.1-201ENST00000605793 379 ntBASIC1.76□□□□□ -2.13
VSX2P58304 RNU6-87P-201ENST00000607561 108 ntBASIC1.76□□□□□ -2.13
VSX2P58304 AC138749.5-201ENST00000611461 208 ntBASIC1.76□□□□□ -2.13
VSX2P58304 AC116165.2-201ENST00000616705 206 ntBASIC1.76□□□□□ -2.13
VSX2P58304 AC068787.1-201ENST00000623908 691 ntBASIC1.76□□□□□ -2.13
VSX2P58304 AL354685.2-201ENST00000448218 1447 ntBASIC1.75□□□□□ -2.13
VSX2P58304 RNU6-942P-201ENST00000363002 107 ntBASIC1.75□□□□□ -2.13
VSX2P58304 RNU5E-5P-201ENST00000365379 116 ntBASIC1.75□□□□□ -2.13
VSX2P58304 MIR676-201ENST00000390702 67 ntBASIC1.75□□□□□ -2.13
VSX2P58304 AL591034.2-201ENST00000402839 359 ntBASIC1.75□□□□□ -2.13
VSX2P58304 AC006366.1-201ENST00000422002 759 ntBASIC1.75□□□□□ -2.13
VSX2P58304 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.75□□□□□ -2.13
VSX2P58304 AL353706.1-201ENST00000436728 494 ntBASIC1.75□□□□□ -2.13
VSX2P58304 AL451074.3-201ENST00000437709 472 ntBASIC1.75□□□□□ -2.13
VSX2P58304 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.75□□□□□ -2.13
VSX2P58304 RPL7P54-201ENST00000438336 674 ntBASIC1.75□□□□□ -2.13
VSX2P58304 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.75□□□□□ -2.13
VSX2P58304 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.75□□□□□ -2.13
VSX2P58304 AP000797.1-201ENST00000478870 387 ntBASIC1.75□□□□□ -2.13
VSX2P58304 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.75□□□□□ -2.13
VSX2P58304 AC104564.1-201ENST00000493028 407 ntBASIC1.75□□□□□ -2.13
VSX2P58304 RPL22P13-201ENST00000493291 347 ntBASIC1.75□□□□□ -2.13
VSX2P58304 RBBP4P6-201ENST00000508098 202 ntBASIC1.75□□□□□ -2.13
VSX2P58304 MRPS17P9-201ENST00000511924 393 ntBASIC1.75□□□□□ -2.13
VSX2P58304 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.75□□□□□ -2.13
VSX2P58304 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.75□□□□□ -2.13
VSX2P58304 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.75□□□□□ -2.13
VSX2P58304 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.75□□□□□ -2.13
VSX2P58304 MTCYBP33-201ENST00000575007 1130 ntBASIC1.75□□□□□ -2.13
VSX2P58304 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.75□□□□□ -2.13
VSX2P58304 AC007229.1-201ENST00000590455 412 ntBASIC1.75□□□□□ -2.13
VSX2P58304 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.75□□□□□ -2.13
VSX2P58304 AL353778.1-201ENST00000603149 408 ntBASIC1.75□□□□□ -2.13
VSX2P58304 AL355297.2-201ENST00000604792 129 ntBASIC1.75□□□□□ -2.13
VSX2P58304 AC009878.1-201ENST00000621819 340 ntBASIC1.75□□□□□ -2.13
VSX2P58304 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.75□□□□□ -2.13
VSX2P58304 AC099654.13-201ENST00000639774 207 ntBASIC1.75□□□□□ -2.13
VSX2P58304 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.75□□□□□ -2.13
VSX2P58304 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.75□□□□□ -2.13
VSX2P58304 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VSX2P58304 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VSX2P58304 RNU6-1159P-201ENST00000362933 107 ntBASIC1.74□□□□□ -2.13
VSX2P58304 RNU6-529P-201ENST00000363383 104 ntBASIC1.74□□□□□ -2.13
VSX2P58304 SNORA16.1-201ENST00000364597 132 ntBASIC1.74□□□□□ -2.13
VSX2P58304 SNORA72.3-201ENST00000365074 132 ntBASIC1.74□□□□□ -2.13
VSX2P58304 SNORA24.1-201ENST00000384401 135 ntBASIC1.74□□□□□ -2.13
VSX2P58304 RNA5SP489-201ENST00000410986 109 ntBASIC1.74□□□□□ -2.13
VSX2P58304 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.74□□□□□ -2.13
VSX2P58304 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.74□□□□□ -2.13
VSX2P58304 AL353621.1-201ENST00000418219 243 ntBASIC1.74□□□□□ -2.13
VSX2P58304 AL365338.1-201ENST00000422282 858 ntBASIC1.74□□□□□ -2.13
VSX2P58304 AL160275.3-201ENST00000423876 471 ntBASIC1.74□□□□□ -2.13
VSX2P58304 AC008267.5-201ENST00000424928 265 ntBASIC1.74□□□□□ -2.13
VSX2P58304 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.74□□□□□ -2.13
VSX2P58304 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.74□□□□□ -2.13
VSX2P58304 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.74□□□□□ -2.13
VSX2P58304 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.74□□□□□ -2.13
VSX2P58304 AC018868.1-201ENST00000491307 315 ntBASIC1.74□□□□□ -2.13
VSX2P58304 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.74□□□□□ -2.13
VSX2P58304 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.74□□□□□ -2.13
VSX2P58304 AC112206.3-201ENST00000514578 389 ntBASIC1.74□□□□□ -2.13
VSX2P58304 RNU6-1129P-201ENST00000515964 104 ntBASIC1.74□□□□□ -2.13
VSX2P58304 RNU6-123P-201ENST00000516163 102 ntBASIC1.74□□□□□ -2.13
VSX2P58304 RNU7-51P-201ENST00000516560 62 ntBASIC1.74□□□□□ -2.13
VSX2P58304 SNORA31.25-201ENST00000517242 134 ntBASIC1.74□□□□□ -2.13
VSX2P58304 RNU2-19P-201ENST00000517288 84 ntBASIC1.74□□□□□ -2.13
VSX2P58304 AC011979.2-201ENST00000527568 352 ntBASIC1.74□□□□□ -2.13
VSX2P58304 AC118273.2-201ENST00000532092 465 ntBASIC1.74□□□□□ -2.13
VSX2P58304 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
VSX2P58304 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.74□□□□□ -2.13
VSX2P58304 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms