Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RNU6-371P-201ENST00000364283 108 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 Y_RNA.510-201ENST00000384511 114 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 SNORA40.3-201ENST00000390964 122 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 MIR1302-8-201ENST00000408342 128 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 RNU6-1140P-201ENST00000410517 106 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 RNU2-63P-201ENST00000410792 194 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 AL139156.1-201ENST00000412785 841 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 MTND2P18-201ENST00000419962 1030 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 AC027124.2-201ENST00000428249 105 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.95□□□□□ -2.1
PKNOX1P55347 AC073614.1-201ENST00000438690 650 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 CALM1P1-201ENST00000442082 433 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 GAPDHP17-201ENST00000449858 1001 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.95□□□□□ -2.1
PKNOX1P55347 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.95□□□□□ -2.1
PKNOX1P55347 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.95□□□□□ -2.1
PKNOX1P55347 RNU6-685P-201ENST00000517088 95 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 AL512310.1-201ENST00000548639 172 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 AL713866.2-201ENST00000603579 219 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 AC068276.1-201ENST00000605793 379 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 AL161423.1-201ENST00000613700 262 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 AC120349.3-201ENST00000624377 529 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 RBBP8P1-201ENST00000449447 1844 ntBASIC1.95□□□□□ -2.1
PKNOX1P55347 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
PKNOX1P55347 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
PKNOX1P55347 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
PKNOX1P55347 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
PKNOX1P55347 RNU6-858P-201ENST00000362436 107 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 RNU6-1179P-201ENST00000384667 107 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 RN7SKP158-201ENST00000410453 326 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 MTND3P17-201ENST00000416968 344 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.94□□□□□ -2.1
PKNOX1P55347 MTCYBP5-201ENST00000423752 1135 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.94□□□□□ -2.1
PKNOX1P55347 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.94□□□□□ -2.1
PKNOX1P55347 ISCA1P6-201ENST00000427740 390 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.94□□□□□ -2.1
PKNOX1P55347 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.94□□□□□ -2.1
PKNOX1P55347 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
PKNOX1P55347 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.94□□□□□ -2.1
PKNOX1P55347 AC140059.1-201ENST00000489238 361 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 AC116562.3-201ENST00000506136 177 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.94□□□□□ -2.1
PKNOX1P55347 AC008413.1-201ENST00000511864 177 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 RNU1-86P-201ENST00000516108 154 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 RNU1-107P-201ENST00000516617 154 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 RNU7-193P-201ENST00000516723 65 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.94□□□□□ -2.1
PKNOX1P55347 FAM92A1P1-201ENST00000528023 890 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 AC068587.5-201ENST00000528506 175 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 DUXAP5-201ENST00000529668 529 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 AP002770.2-201ENST00000543613 532 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.94□□□□□ -2.1
PKNOX1P55347 OR11H5P-201ENST00000554039 926 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.94□□□□□ -2.1
PKNOX1P55347 MIR1273D-201ENST00000577266 86 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 MIR4672-201ENST00000583126 81 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
PKNOX1P55347 AC008749.1-201ENST00000597650 306 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 BNIP3P30-201ENST00000601184 574 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 AF131215.7-201ENST00000602443 707 ntBASIC1.94□□□□□ -2.1
PKNOX1P55347 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PKNOX1P55347 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PKNOX1P55347 AC138393.1-203ENST00000327086 343 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 RNU6-179P-201ENST00000363350 107 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 RNA5SP240-201ENST00000365355 128 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 Y_RNA.367-201ENST00000365544 101 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
PKNOX1P55347 XGY1-201ENST00000381172 446 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 RNU6-843P-201ENST00000384454 104 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 Y_RNA.576-201ENST00000384781 102 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 UBE2V1P2-201ENST00000397758 440 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 SUMO2P12-201ENST00000405924 140 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 RNU6-248P-201ENST00000410720 107 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 RNA5SP270-201ENST00000411361 118 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.93□□□□□ -2.1
PKNOX1P55347 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.93□□□□□ -2.1
PKNOX1P55347 AC000111.3-201ENST00000433478 193 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 AL136380.1-201ENST00000447970 162 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.93□□□□□ -2.1
PKNOX1P55347 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.93□□□□□ -2.1
PKNOX1P55347 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.93□□□□□ -2.1
PKNOX1P55347 SNRPGP9-201ENST00000456025 225 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 MTND3P7-201ENST00000474435 343 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.93□□□□□ -2.1
PKNOX1P55347 AC119751.5-201ENST00000514077 770 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 Y_RNA.687-201ENST00000516558 91 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 AP004607.1-201ENST00000524456 203 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.93□□□□□ -2.1
PKNOX1P55347 AC087883.1-201ENST00000551882 391 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.93□□□□□ -2.1
PKNOX1P55347 ANP32BP3-201ENST00000559213 706 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 MIR5089-201ENST00000580047 84 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.93□□□□□ -2.1
PKNOX1P55347 AC078899.2-201ENST00000595282 212 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 AP001506.1-201ENST00000615444 211 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 AL162373.1-201ENST00000620433 407 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 SDR42E1P4-201ENST00000620894 481 ntBASIC1.93□□□□□ -2.1
PKNOX1P55347 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms