Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 U4.5-201ENST00000617137 123 ntBASIC2.63□□□□□ -1.99
CDH13P55290 RMST_7.1-201ENST00000621935 268 ntBASIC2.63□□□□□ -1.99
CDH13P55290 Z69720.2-201ENST00000624755 279 ntBASIC2.63□□□□□ -1.99
CDH13P55290 AP003400.5-201ENST00000624827 617 ntBASIC2.63□□□□□ -1.99
CDH13P55290 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDH13P55290 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.62□□□□□ -1.99
CDH13P55290 RNU1-112P-201ENST00000364401 164 ntBASIC2.62□□□□□ -1.99
CDH13P55290 RNU6-1180P-201ENST00000364935 107 ntBASIC2.62□□□□□ -1.99
CDH13P55290 RNU6-843P-201ENST00000384454 104 ntBASIC2.62□□□□□ -1.99
CDH13P55290 AL138827.1-201ENST00000402666 306 ntBASIC2.62□□□□□ -1.99
CDH13P55290 RNU6-1328P-201ENST00000410938 106 ntBASIC2.62□□□□□ -1.99
CDH13P55290 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.62□□□□□ -1.99
CDH13P55290 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.62□□□□□ -1.99
CDH13P55290 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.62□□□□□ -1.99
CDH13P55290 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.62□□□□□ -1.99
CDH13P55290 AL365400.1-201ENST00000431854 640 ntBASIC2.62□□□□□ -1.99
CDH13P55290 RPL23AP83-201ENST00000434984 473 ntBASIC2.62□□□□□ -1.99
CDH13P55290 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.62□□□□□ -1.99
CDH13P55290 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.62□□□□□ -1.99
CDH13P55290 AP001324.2-201ENST00000461163 319 ntBASIC2.62□□□□□ -1.99
CDH13P55290 MED28P2-201ENST00000475771 317 ntBASIC2.62□□□□□ -1.99
CDH13P55290 RPL23AP70-201ENST00000483361 460 ntBASIC2.62□□□□□ -1.99
CDH13P55290 RPL22P13-201ENST00000493291 347 ntBASIC2.62□□□□□ -1.99
CDH13P55290 HIGD1AP13-201ENST00000509878 289 ntBASIC2.62□□□□□ -1.99
CDH13P55290 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.62□□□□□ -1.99
CDH13P55290 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.62□□□□□ -1.99
CDH13P55290 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.62□□□□□ -1.99
CDH13P55290 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.62□□□□□ -1.99
CDH13P55290 BTF3P12-201ENST00000519620 469 ntBASIC2.62□□□□□ -1.99
CDH13P55290 RPL7P20-201ENST00000520308 745 ntBASIC2.62□□□□□ -1.99
CDH13P55290 AC016957.1-201ENST00000534895 309 ntBASIC2.62□□□□□ -1.99
CDH13P55290 AC079600.2-201ENST00000550076 130 ntBASIC2.62□□□□□ -1.99
CDH13P55290 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.62□□□□□ -1.99
CDH13P55290 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.62□□□□□ -1.99
CDH13P55290 AC027807.1-201ENST00000559921 996 ntBASIC2.62□□□□□ -1.99
CDH13P55290 AL138976.2-201ENST00000563989 694 ntBASIC2.62□□□□□ -1.99
CDH13P55290 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.62□□□□□ -1.99
CDH13P55290 MIR4635-201ENST00000583759 79 ntBASIC2.62□□□□□ -1.99
CDH13P55290 MIR4765-201ENST00000585007 77 ntBASIC2.62□□□□□ -1.99
CDH13P55290 AL162413.1-201ENST00000603198 110 ntBASIC2.62□□□□□ -1.99
CDH13P55290 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.62□□□□□ -1.99
CDH13P55290 AC012557.2-201ENST00000605919 418 ntBASIC2.62□□□□□ -1.99
CDH13P55290 AF250324.2-201ENST00000608299 610 ntBASIC2.62□□□□□ -1.99
CDH13P55290 Z82243.1-201ENST00000609432 473 ntBASIC2.62□□□□□ -1.99
CDH13P55290 U2.17-201ENST00000611454 95 ntBASIC2.62□□□□□ -1.99
CDH13P55290 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CDH13P55290 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.62□□□□□ -1.99
CDH13P55290 MIR1321-201ENST00000637766 79 ntBASIC2.62□□□□□ -1.99
CDH13P55290 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.62□□□□□ -1.99
CDH13P55290 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CDH13P55290 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.61□□□□□ -1.99
CDH13P55290 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDH13P55290 RNU6-82P-201ENST00000363970 107 ntBASIC2.61□□□□□ -1.99
CDH13P55290 Y_RNA.372-201ENST00000365599 102 ntBASIC2.61□□□□□ -1.99
CDH13P55290 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH13P55290 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDH13P55290 RNU1-109P-201ENST00000383960 147 ntBASIC2.61□□□□□ -1.99
CDH13P55290 SNORA9-201ENST00000384215 133 ntBASIC2.61□□□□□ -1.99
CDH13P55290 RNU6-1215P-201ENST00000384441 102 ntBASIC2.61□□□□□ -1.99
CDH13P55290 RNA5SP210-201ENST00000391034 120 ntBASIC2.61□□□□□ -1.99
CDH13P55290 RPS4XP7-201ENST00000406274 780 ntBASIC2.61□□□□□ -1.99
CDH13P55290 AL590002.1-201ENST00000406554 418 ntBASIC2.61□□□□□ -1.99
CDH13P55290 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH13P55290 RNU2-25P-201ENST00000411041 191 ntBASIC2.61□□□□□ -1.99
CDH13P55290 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH13P55290 AC092427.1-202ENST00000430569 476 ntBASIC2.61□□□□□ -1.99
CDH13P55290 FABP5P14-201ENST00000437273 393 ntBASIC2.61□□□□□ -1.99
CDH13P55290 SEPT14P3-201ENST00000439401 183 ntBASIC2.61□□□□□ -1.99
CDH13P55290 AL732372.2-207ENST00000445840 183 ntBASIC2.61□□□□□ -1.99
CDH13P55290 SEPT14P2-201ENST00000453405 183 ntBASIC2.61□□□□□ -1.99
CDH13P55290 AP000705.1-201ENST00000454567 350 ntBASIC2.61□□□□□ -1.99
CDH13P55290 RPL7P43-201ENST00000478876 753 ntBASIC2.61□□□□□ -1.99
CDH13P55290 AC018437.1-201ENST00000492214 406 ntBASIC2.61□□□□□ -1.99
CDH13P55290 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.61□□□□□ -1.99
CDH13P55290 SEPT14P4-201ENST00000513445 186 ntBASIC2.61□□□□□ -1.99
CDH13P55290 RNA5SP112-201ENST00000515937 99 ntBASIC2.61□□□□□ -1.99
CDH13P55290 RNU4-29P-201ENST00000515943 174 ntBASIC2.61□□□□□ -1.99
CDH13P55290 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.61□□□□□ -1.99
CDH13P55290 SNORA43.2-201ENST00000516652 128 ntBASIC2.61□□□□□ -1.99
CDH13P55290 SNORA25.17-201ENST00000517184 124 ntBASIC2.61□□□□□ -1.99
CDH13P55290 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH13P55290 FO082796.1-201ENST00000523795 183 ntBASIC2.61□□□□□ -1.99
CDH13P55290 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH13P55290 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.61□□□□□ -1.99
CDH13P55290 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH13P55290 MIR4325-201ENST00000583049 90 ntBASIC2.61□□□□□ -1.99
CDH13P55290 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.61□□□□□ -1.99
CDH13P55290 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.61□□□□□ -1.99
CDH13P55290 AC244517.12-201ENST00000623581 663 ntBASIC2.61□□□□□ -1.99
CDH13P55290 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDH13P55290 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDH13P55290 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.6□□□□□ -1.99
CDH13P55290 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.6□□□□□ -1.99
CDH13P55290 Z82195.2-201ENST00000612348 18351 ntBASIC2.6□□□□□ -1.99
CDH13P55290 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
CDH13P55290 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDH13P55290 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
CDH13P55290 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CDH13P55290 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDH13P55290 RNU6-858P-201ENST00000362436 107 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms