Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RPL7P20-201ENST00000520308 745 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 AC009063.1-201ENST00000563342 702 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 AC092325.1-201ENST00000566449 554 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 MTCYBP33-201ENST00000575007 1130 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 AL645944.1-201ENST00000603857 493 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 AC010297.1-201ENST00000623948 149 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 MTND4P14-201ENST00000435799 1354 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 ZNF680P1-201ENST00000436625 1469 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.69□□□□□ -1.98
LIMK1P53667 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
LIMK1P53667 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
LIMK1P53667 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
LIMK1P53667 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
LIMK1P53667 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.68□□□□□ -1.98
LIMK1P53667 Y_RNA.1-201ENST00000352915 104 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 RNU6-858P-201ENST00000362436 107 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 Z98749.2-208ENST00000381646 500 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 RNU6-259P-201ENST00000383999 107 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 MIR578-201ENST00000384828 96 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 MIR10A-201ENST00000385043 110 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 RNU6-550P-201ENST00000391057 101 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 RNU4-55P-201ENST00000410731 137 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.68□□□□□ -1.98
LIMK1P53667 Z98742.3-201ENST00000418637 326 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 MTCYBP5-201ENST00000423752 1135 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 AL596276.1-201ENST00000434465 418 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 AC011753.1-201ENST00000451001 220 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 HMGB1P30-201ENST00000492455 606 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.68□□□□□ -1.98
LIMK1P53667 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.68□□□□□ -1.98
LIMK1P53667 AC012507.3-201ENST00000603556 477 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 AL136363.2-201ENST00000604173 851 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 NDUFA8P1-201ENST00000605525 367 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 AC090115.4-201ENST00000609970 188 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 AL020991.1-201ENST00000612314 373 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 MIR6134-201ENST00000617606 109 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.68□□□□□ -1.98
LIMK1P53667 uc_338.11-201ENST00000619132 160 ntBASIC2.68□□□□□ -1.98
LIMK1P53667 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.68□□□□□ -1.98
LIMK1P53667 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.68□□□□□ -1.98
LIMK1P53667 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
LIMK1P53667 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.67□□□□□ -1.98
LIMK1P53667 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.67□□□□□ -1.98
LIMK1P53667 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LIMK1P53667 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LIMK1P53667 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LIMK1P53667 SNORA25.6-201ENST00000364121 118 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 RNU6-606P-201ENST00000384721 111 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 AL591416.1-201ENST00000404015 867 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 RNU2-66P-201ENST00000410650 161 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 RNU4-53P-201ENST00000410828 140 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 AL627311.1-201ENST00000431514 115 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 MICF-203ENST00000432679 129 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.67□□□□□ -1.98
LIMK1P53667 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.67□□□□□ -1.98
LIMK1P53667 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.67□□□□□ -1.98
LIMK1P53667 RPS27AP9-201ENST00000477681 438 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 AC108078.1-201ENST00000508073 725 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 MTCO3P7-201ENST00000510008 774 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 RNU6-548P-201ENST00000517083 115 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.67□□□□□ -1.98
LIMK1P53667 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.67□□□□□ -1.98
LIMK1P53667 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.67□□□□□ -1.98
LIMK1P53667 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.67□□□□□ -1.98
LIMK1P53667 AC025678.1-201ENST00000567861 338 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 AC103987.3-201ENST00000582071 292 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.67□□□□□ -1.98
LIMK1P53667 AL391813.1-201ENST00000603098 260 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 AC091152.3-201ENST00000604227 325 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 AC087045.1-201ENST00000605856 382 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 AC025754.2-201ENST00000606491 432 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 AC011890.2-201ENST00000613393 294 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 AL158209.2-201ENST00000619266 216 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 AC010338.1-201ENST00000621823 717 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.67□□□□□ -1.98
LIMK1P53667 MIR203B-201ENST00000636080 86 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 HSPA8P4-201ENST00000511877 1920 ntBASIC2.67□□□□□ -1.98
LIMK1P53667 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.67□□□□□ -1.98
LIMK1P53667 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
LIMK1P53667 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LIMK1P53667 RNU1-35P-201ENST00000362782 153 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 SNORD3E-201ENST00000362899 217 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 RNU6-371P-201ENST00000364283 108 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 RNU4-24P-201ENST00000364565 139 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 SNORA75B-201ENST00000384053 137 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 MIR764-201ENST00000390811 85 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 RNU2-16P-201ENST00000410712 136 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 MTCO3P41-201ENST00000414801 328 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 AC009963.1-201ENST00000417265 157 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 PGBD4P6-201ENST00000421501 610 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.66□□□□□ -1.98
LIMK1P53667 DLGAP5P1-201ENST00000430307 464 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 AC000111.3-201ENST00000433478 193 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.66□□□□□ -1.98
LIMK1P53667 MTCO2P7-201ENST00000446518 666 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LIMK1P53667 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LIMK1P53667 RNU7-63P-201ENST00000459054 62 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms