Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC009033.1-201ENST00000624279 431 ntBASIC2.52□□□□□ -2.01
NKX2-1P43699 Z69720.2-201ENST00000624755 279 ntBASIC2.52□□□□□ -2.01
NKX2-1P43699 AC012442.3-202ENST00000636742 206 ntBASIC2.52□□□□□ -2.01
NKX2-1P43699 AL049781.1-201ENST00000623195 3585 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.51□□□□□ -2.01
NKX2-1P43699 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NKX2-1P43699 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NKX2-1P43699 SNORD3E-201ENST00000362899 217 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 RNA5SP50-201ENST00000363731 107 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 RNU6-867P-201ENST00000364956 107 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NKX2-1P43699 MIR10A-201ENST00000385043 110 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 RNA5SP219-201ENST00000390940 113 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 AL513475.1-201ENST00000406602 315 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.51□□□□□ -2.01
NKX2-1P43699 RPL35AP12-201ENST00000425362 338 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 AC092017.2-201ENST00000427600 362 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 SAR1AP4-201ENST00000429225 591 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 HIGD1AP2-201ENST00000446367 280 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.51□□□□□ -2.01
NKX2-1P43699 AL671855.1-201ENST00000446875 1203 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 AC092001.1-201ENST00000453012 261 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 AC013470.1-201ENST00000453438 462 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 RNU7-138P-201ENST00000459479 64 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.51□□□□□ -2.01
NKX2-1P43699 AC107626.1-201ENST00000471084 183 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 RN7SL20P-201ENST00000488827 297 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 MRPS36P2-201ENST00000512569 299 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.51□□□□□ -2.01
NKX2-1P43699 AC034105.4-201ENST00000568304 277 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 MIR5692C1-201ENST00000585309 91 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 AC023043.2-201ENST00000589678 1026 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.51□□□□□ -2.01
NKX2-1P43699 AC009248.2-201ENST00000619826 254 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
NKX2-1P43699 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 HAUS6P2-201ENST00000433254 2404 ntBASIC2.51□□□□□ -2.01
NKX2-1P43699 MTND5P1-201ENST00000445440 1375 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 RNU6-266P-201ENST00000364225 107 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 RNU6-1013P-201ENST00000384180 107 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 RNU6-831P-201ENST00000384548 107 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 AL360182.1-201ENST00000397433 468 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.5□□□□□ -2.01
NKX2-1P43699 MICF-203ENST00000432679 129 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 AL159987.2-201ENST00000432754 307 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.5□□□□□ -2.01
NKX2-1P43699 AMD1P1-201ENST00000457220 922 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 MTCO1P29-201ENST00000496868 288 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 GZMAP1-201ENST00000503054 631 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.5□□□□□ -2.01
NKX2-1P43699 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.5□□□□□ -2.01
NKX2-1P43699 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.5□□□□□ -2.01
NKX2-1P43699 RNU6-875P-201ENST00000516488 106 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 RNU5B-3P-201ENST00000516601 115 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 Y_RNA.691-201ENST00000516611 103 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 ACA59.2-201ENST00000517061 156 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 AP000889.2-201ENST00000532684 490 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.5□□□□□ -2.01
NKX2-1P43699 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.5□□□□□ -2.01
NKX2-1P43699 VN1R107P-201ENST00000601784 209 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NKX2-1P43699 AC069234.5-201ENST00000611056 416 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 FAM157A-202ENST00000615155 405 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 ATP5A1P2-202ENST00000616464 443 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 AC104260.1-201ENST00000616660 539 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.5□□□□□ -2.01
NKX2-1P43699 AC100810.6-201ENST00000638068 285 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NKX2-1P43699 MTND5P30-201ENST00000452896 1731 ntBASIC2.5□□□□□ -2.01
NKX2-1P43699 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NKX2-1P43699 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NKX2-1P43699 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
NKX2-1P43699 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.49□□□□□ -2.01
NKX2-1P43699 Y_RNA.373-201ENST00000365600 103 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 AL451074.5-201ENST00000415894 435 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.49□□□□□ -2.01
NKX2-1P43699 HMGN2P31-201ENST00000432430 273 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 AL645568.3-201ENST00000433683 316 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 AL513043.1-201ENST00000439124 535 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 RPL7P12-201ENST00000446719 750 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.49□□□□□ -2.01
NKX2-1P43699 MTND1P11-201ENST00000456661 876 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 AC006445.1-201ENST00000491925 405 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 AC091951.2-201ENST00000500762 203 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NKX2-1P43699 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.49□□□□□ -2.01
NKX2-1P43699 SNORA19.2-201ENST00000516013 114 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 RNU6-581P-201ENST00000516214 105 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 RNU6-1038P-201ENST00000516516 104 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 AC109479.2-201ENST00000517842 174 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.49□□□□□ -2.01
NKX2-1P43699 AC107953.1-201ENST00000522216 297 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.49□□□□□ -2.01
NKX2-1P43699 CR383656.8-201ENST00000549046 145 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.49□□□□□ -2.01
NKX2-1P43699 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.49□□□□□ -2.01
NKX2-1P43699 MIR3616-201ENST00000584070 92 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 MIR3922-201ENST00000585192 84 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 APOOP1-201ENST00000604695 592 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 AC245389.1-201ENST00000605141 529 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms