Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 U2.11-201ENST00000616345 191 ntBASIC1.98□□□□□ -2.09
SSR1P43307 U2.2-201ENST00000616535 191 ntBASIC1.98□□□□□ -2.09
SSR1P43307 U2.3-201ENST00000617785 191 ntBASIC1.98□□□□□ -2.09
SSR1P43307 U2.19-201ENST00000618602 191 ntBASIC1.98□□□□□ -2.09
SSR1P43307 RNU2-1-201ENST00000618664 191 ntBASIC1.98□□□□□ -2.09
SSR1P43307 U2.6-201ENST00000619225 191 ntBASIC1.98□□□□□ -2.09
SSR1P43307 U2.5-201ENST00000619465 191 ntBASIC1.98□□□□□ -2.09
SSR1P43307 U2.10-201ENST00000620268 191 ntBASIC1.98□□□□□ -2.09
SSR1P43307 YWHAEP7-203ENST00000622054 312 ntBASIC1.98□□□□□ -2.09
SSR1P43307 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
SSR1P43307 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SSR1P43307 TEX21P-201ENST00000447107 1476 ntBASIC1.97□□□□□ -2.09
SSR1P43307 SNORD115-3-201ENST00000363100 82 ntBASIC1.97□□□□□ -2.09
SSR1P43307 RNU6-960P-201ENST00000364056 120 ntBASIC1.97□□□□□ -2.09
SSR1P43307 MIR578-201ENST00000384828 96 ntBASIC1.97□□□□□ -2.09
SSR1P43307 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SSR1P43307 AL031779.1-201ENST00000415663 330 ntBASIC1.97□□□□□ -2.09
SSR1P43307 RPS24P7-201ENST00000416921 246 ntBASIC1.97□□□□□ -2.09
SSR1P43307 AC138623.1-201ENST00000418060 216 ntBASIC1.97□□□□□ -2.09
SSR1P43307 AL353621.1-201ENST00000418219 243 ntBASIC1.97□□□□□ -2.09
SSR1P43307 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.97□□□□□ -2.09
SSR1P43307 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.97□□□□□ -2.09
SSR1P43307 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.97□□□□□ -2.09
SSR1P43307 AL512286.1-201ENST00000439244 400 ntBASIC1.97□□□□□ -2.09
SSR1P43307 MTND6P13-201ENST00000443510 523 ntBASIC1.97□□□□□ -2.09
SSR1P43307 RNU1-98P-201ENST00000458992 160 ntBASIC1.97□□□□□ -2.09
SSR1P43307 MED28P2-201ENST00000475771 317 ntBASIC1.97□□□□□ -2.09
SSR1P43307 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.97□□□□□ -2.09
SSR1P43307 RNU7-51P-201ENST00000516560 62 ntBASIC1.97□□□□□ -2.09
SSR1P43307 RANP3-201ENST00000530970 276 ntBASIC1.97□□□□□ -2.09
SSR1P43307 GNAI2P1-201ENST00000541815 315 ntBASIC1.97□□□□□ -2.09
SSR1P43307 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.97□□□□□ -2.09
SSR1P43307 AC093249.1-201ENST00000567049 203 ntBASIC1.97□□□□□ -2.09
SSR1P43307 MIR548AB-201ENST00000584917 84 ntBASIC1.97□□□□□ -2.09
SSR1P43307 AC008751.2-201ENST00000597885 980 ntBASIC1.97□□□□□ -2.09
SSR1P43307 RPL30P11-203ENST00000598995 310 ntBASIC1.97□□□□□ -2.09
SSR1P43307 BNIP3P30-201ENST00000601184 574 ntBASIC1.97□□□□□ -2.09
SSR1P43307 AC018638.7-201ENST00000605836 1114 ntBASIC1.97□□□□□ -2.09
SSR1P43307 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
SSR1P43307 AC009487.4-201ENST00000624969 3585 ntBASIC1.97□□□□□ -2.09
SSR1P43307 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SSR1P43307 MIR126-201ENST00000362291 85 ntBASIC1.96□□□□□ -2.1
SSR1P43307 RNU6-942P-201ENST00000363002 107 ntBASIC1.96□□□□□ -2.1
SSR1P43307 RNU5F-7P-201ENST00000363696 115 ntBASIC1.96□□□□□ -2.1
SSR1P43307 SNORA16.1-201ENST00000364597 132 ntBASIC1.96□□□□□ -2.1
SSR1P43307 SNORA25B-201ENST00000365507 128 ntBASIC1.96□□□□□ -2.1
SSR1P43307 MIR10A-201ENST00000385043 110 ntBASIC1.96□□□□□ -2.1
SSR1P43307 RPL23AP39-201ENST00000415533 405 ntBASIC1.96□□□□□ -2.1
SSR1P43307 RPL22P18-201ENST00000417197 377 ntBASIC1.96□□□□□ -2.1
SSR1P43307 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.96□□□□□ -2.1
SSR1P43307 AL365338.1-201ENST00000422282 858 ntBASIC1.96□□□□□ -2.1
SSR1P43307 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.96□□□□□ -2.1
SSR1P43307 AC119618.1-201ENST00000434191 222 ntBASIC1.96□□□□□ -2.1
SSR1P43307 CALM1P1-201ENST00000442082 433 ntBASIC1.96□□□□□ -2.1
SSR1P43307 Z73417.1-201ENST00000447373 778 ntBASIC1.96□□□□□ -2.1
SSR1P43307 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.96□□□□□ -2.1
SSR1P43307 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.96□□□□□ -2.1
SSR1P43307 MTND1P12-201ENST00000455231 147 ntBASIC1.96□□□□□ -2.1
SSR1P43307 AC112204.1-201ENST00000502591 103 ntBASIC1.96□□□□□ -2.1
SSR1P43307 AC108078.2-201ENST00000510750 236 ntBASIC1.96□□□□□ -2.1
SSR1P43307 AC008834.1-201ENST00000511612 175 ntBASIC1.96□□□□□ -2.1
SSR1P43307 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.96□□□□□ -2.1
SSR1P43307 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.96□□□□□ -2.1
SSR1P43307 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.96□□□□□ -2.1
SSR1P43307 AL031274.2-201ENST00000599419 203 ntBASIC1.96□□□□□ -2.1
SSR1P43307 AL031775.1-201ENST00000607014 887 ntBASIC1.96□□□□□ -2.1
SSR1P43307 AC087241.4-201ENST00000612441 480 ntBASIC1.96□□□□□ -2.1
SSR1P43307 FRG1KP-201ENST00000623592 341 ntBASIC1.96□□□□□ -2.1
SSR1P43307 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SSR1P43307 RNU6-529P-201ENST00000363383 104 ntBASIC1.95□□□□□ -2.1
SSR1P43307 SNORA24.1-201ENST00000384401 135 ntBASIC1.95□□□□□ -2.1
SSR1P43307 SNORA8-201ENST00000384574 139 ntBASIC1.95□□□□□ -2.1
SSR1P43307 MIR23A-201ENST00000385245 73 ntBASIC1.95□□□□□ -2.1
SSR1P43307 Y_RNA.623-201ENST00000411128 95 ntBASIC1.95□□□□□ -2.1
SSR1P43307 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.95□□□□□ -2.1
SSR1P43307 AL356583.2-201ENST00000426536 280 ntBASIC1.95□□□□□ -2.1
SSR1P43307 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.95□□□□□ -2.1
SSR1P43307 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.95□□□□□ -2.1
SSR1P43307 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.95□□□□□ -2.1
SSR1P43307 BZW1P2-201ENST00000473537 826 ntBASIC1.95□□□□□ -2.1
SSR1P43307 AC018437.1-201ENST00000492214 406 ntBASIC1.95□□□□□ -2.1
SSR1P43307 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.95□□□□□ -2.1
SSR1P43307 RNU5B-3P-201ENST00000516601 115 ntBASIC1.95□□□□□ -2.1
SSR1P43307 PCMTD1P2-201ENST00000565017 355 ntBASIC1.95□□□□□ -2.1
SSR1P43307 MIR4648-201ENST00000580107 72 ntBASIC1.95□□□□□ -2.1
SSR1P43307 CLIC4P2-201ENST00000601934 717 ntBASIC1.95□□□□□ -2.1
SSR1P43307 AL353778.1-201ENST00000603149 408 ntBASIC1.95□□□□□ -2.1
SSR1P43307 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
SSR1P43307 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.95□□□□□ -2.1
SSR1P43307 AC017037.3-201ENST00000625016 472 ntBASIC1.95□□□□□ -2.1
SSR1P43307 AC090517.3-201ENST00000625170 141 ntBASIC1.95□□□□□ -2.1
SSR1P43307 Y_RNA.40-201ENST00000362645 93 ntBASIC1.94□□□□□ -2.1
SSR1P43307 RNU6-395P-201ENST00000365662 106 ntBASIC1.94□□□□□ -2.1
SSR1P43307 MIR934-201ENST00000401241 83 ntBASIC1.94□□□□□ -2.1
SSR1P43307 MIR1302-8-201ENST00000408342 128 ntBASIC1.94□□□□□ -2.1
SSR1P43307 Y_RNA.608-201ENST00000410647 95 ntBASIC1.94□□□□□ -2.1
SSR1P43307 RN7SKP192-201ENST00000411291 327 ntBASIC1.94□□□□□ -2.1
SSR1P43307 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.94□□□□□ -2.1
SSR1P43307 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.94□□□□□ -2.1
SSR1P43307 UBE2V1P10-201ENST00000414685 269 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms