Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 Y_RNA.490-201ENST00000384413 102 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 RNU6-1179P-201ENST00000384667 107 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 RNU6-1025P-201ENST00000410629 104 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXD12P35452 AC093151.1-201ENST00000427711 313 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 SNRPEP9-201ENST00000436794 238 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 AC087884.1-201ENST00000469738 328 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 AC022493.1-201ENST00000492984 337 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXD12P35452 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXD12P35452 AP003122.3-201ENST00000526316 255 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 CYCSP27-201ENST00000527643 293 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 AC084851.1-201ENST00000529105 249 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HOXD12P35452 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXD12P35452 AC025281.1-201ENST00000567026 265 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXD12P35452 MIR4719-201ENST00000585233 84 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 MIR5692C1-201ENST00000585309 91 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 AC010620.2-201ENST00000600135 313 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 AL355877.2-201ENST00000603670 358 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXD12P35452 MIR7106-201ENST00000612419 65 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 AL157817.1-201ENST00000614264 790 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HOXD12P35452 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXD12P35452 AC006026.1-201ENST00000444025 1803 ntBASIC3.3□□□□□ -1.88
HOXD12P35452 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HOXD12P35452 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXD12P35452 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXD12P35452 Y_RNA.33-201ENST00000362591 102 ntBASIC3.29□□□□□ -1.88
HOXD12P35452 RNU4-79P-201ENST00000362764 141 ntBASIC3.29□□□□□ -1.88
HOXD12P35452 Y_RNA.67-201ENST00000362870 100 ntBASIC3.29□□□□□ -1.88
HOXD12P35452 RNA5SP383-201ENST00000362934 120 ntBASIC3.29□□□□□ -1.88
HOXD12P35452 RNU6-884P-201ENST00000363889 107 ntBASIC3.29□□□□□ -1.88
HOXD12P35452 RNU6-395P-201ENST00000365662 106 ntBASIC3.29□□□□□ -1.88
HOXD12P35452 RN7SKP220-201ENST00000410611 288 ntBASIC3.29□□□□□ -1.88
HOXD12P35452 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXD12P35452 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXD12P35452 VN1R36P-201ENST00000414936 291 ntBASIC3.29□□□□□ -1.88
HOXD12P35452 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXD12P35452 AC107083.1-201ENST00000439643 279 ntBASIC3.29□□□□□ -1.88
HOXD12P35452 AC117503.1-201ENST00000472241 394 ntBASIC3.29□□□□□ -1.88
HOXD12P35452 AC096576.1-201ENST00000489014 359 ntBASIC3.29□□□□□ -1.88
HOXD12P35452 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXD12P35452 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXD12P35452 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXD12P35452 RNU6-1069P-201ENST00000516612 133 ntBASIC3.29□□□□□ -1.88
HOXD12P35452 SNORA64.4-201ENST00000516632 81 ntBASIC3.29□□□□□ -1.88
HOXD12P35452 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.29□□□□□ -1.88
HOXD12P35452 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXD12P35452 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HOXD12P35452 AC007536.1-201ENST00000533382 349 ntBASIC3.29□□□□□ -1.88
HOXD12P35452 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXD12P35452 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXD12P35452 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.29□□□□□ -1.88
HOXD12P35452 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXD12P35452 AC002044.1-201ENST00000606707 158 ntBASIC3.29□□□□□ -1.88
HOXD12P35452 AL031601.2-202ENST00000622650 282 ntBASIC3.29□□□□□ -1.88
HOXD12P35452 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXD12P35452 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXD12P35452 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HOXD12P35452 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.29□□□□□ -1.88
HOXD12P35452 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXD12P35452 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXD12P35452 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HOXD12P35452 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXD12P35452 Y_RNA.474-201ENST00000384341 102 ntBASIC3.28□□□□□ -1.88
HOXD12P35452 Y_RNA.480-201ENST00000384364 102 ntBASIC3.28□□□□□ -1.88
HOXD12P35452 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXD12P35452 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXD12P35452 AC233279.1-201ENST00000455300 423 ntBASIC3.28□□□□□ -1.88
HOXD12P35452 RPL23AP67-201ENST00000465341 474 ntBASIC3.28□□□□□ -1.88
HOXD12P35452 MTND4P17-201ENST00000470444 350 ntBASIC3.28□□□□□ -1.88
HOXD12P35452 MTCO1P29-201ENST00000496868 288 ntBASIC3.28□□□□□ -1.88
HOXD12P35452 SEM1P1-201ENST00000506694 209 ntBASIC3.28□□□□□ -1.88
HOXD12P35452 AC008716.1-201ENST00000511084 513 ntBASIC3.28□□□□□ -1.88
HOXD12P35452 RNU6-566P-201ENST00000516790 107 ntBASIC3.28□□□□□ -1.88
HOXD12P35452 RNA5SP165-201ENST00000517142 115 ntBASIC3.28□□□□□ -1.88
HOXD12P35452 SNORA31.26-201ENST00000517250 137 ntBASIC3.28□□□□□ -1.88
HOXD12P35452 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.28□□□□□ -1.88
HOXD12P35452 AC022634.1-201ENST00000520765 532 ntBASIC3.28□□□□□ -1.88
HOXD12P35452 AC245166.1-201ENST00000521012 253 ntBASIC3.28□□□□□ -1.88
HOXD12P35452 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXD12P35452 RNU6-323P-201ENST00000521915 107 ntBASIC3.28□□□□□ -1.88
HOXD12P35452 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXD12P35452 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.28□□□□□ -1.88
HOXD12P35452 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HOXD12P35452 AC026333.2-201ENST00000542164 106 ntBASIC3.28□□□□□ -1.88
HOXD12P35452 NACAP3-201ENST00000552100 481 ntBASIC3.28□□□□□ -1.88
HOXD12P35452 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXD12P35452 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HOXD12P35452 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXD12P35452 HMGN2P15-201ENST00000585707 270 ntBASIC3.28□□□□□ -1.88
HOXD12P35452 AC004805.2-201ENST00000605382 482 ntBASIC3.28□□□□□ -1.88
HOXD12P35452 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXD12P35452 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
HOXD12P35452 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXD12P35452 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms