Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 MIR3672-201ENST00000584290 82 ntBASIC3.26□□□□□ -1.89
CIITAP33076 AC005498.1-201ENST00000592125 465 ntBASIC3.26□□□□□ -1.89
CIITAP33076 AC024153.1-201ENST00000603103 365 ntBASIC3.26□□□□□ -1.89
CIITAP33076 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.26□□□□□ -1.89
CIITAP33076 ATP1B3P1-201ENST00000605365 821 ntBASIC3.26□□□□□ -1.89
CIITAP33076 FAM157A-202ENST00000615155 405 ntBASIC3.26□□□□□ -1.89
CIITAP33076 Z99571.1-201ENST00000636677 394 ntBASIC3.26□□□□□ -1.89
CIITAP33076 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.26□□□□□ -1.89
CIITAP33076 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CIITAP33076 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CIITAP33076 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
CIITAP33076 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.25□□□□□ -1.89
CIITAP33076 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CIITAP33076 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CIITAP33076 RNU1-35P-201ENST00000362782 153 ntBASIC3.25□□□□□ -1.89
CIITAP33076 Y_RNA.58-201ENST00000362807 102 ntBASIC3.25□□□□□ -1.89
CIITAP33076 RNU6-1252P-201ENST00000363054 104 ntBASIC3.25□□□□□ -1.89
CIITAP33076 Y_RNA.154-201ENST00000363624 102 ntBASIC3.25□□□□□ -1.89
CIITAP33076 SNORA80A-201ENST00000363922 136 ntBASIC3.25□□□□□ -1.89
CIITAP33076 RNY3P1-201ENST00000365085 102 ntBASIC3.25□□□□□ -1.89
CIITAP33076 Y_RNA.339-201ENST00000365325 102 ntBASIC3.25□□□□□ -1.89
CIITAP33076 RNY3-201ENST00000365484 102 ntBASIC3.25□□□□□ -1.89
CIITAP33076 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CIITAP33076 Y_RNA.490-201ENST00000384413 102 ntBASIC3.25□□□□□ -1.89
CIITAP33076 EIF4E2P1-201ENST00000393781 255 ntBASIC3.25□□□□□ -1.89
CIITAP33076 BTF3L4P3-201ENST00000418879 476 ntBASIC3.25□□□□□ -1.89
CIITAP33076 MTND1P14-201ENST00000427400 950 ntBASIC3.25□□□□□ -1.89
CIITAP33076 NDUFA5P4-201ENST00000436704 385 ntBASIC3.25□□□□□ -1.89
CIITAP33076 FABP5P15-201ENST00000453566 214 ntBASIC3.25□□□□□ -1.89
CIITAP33076 PPP1R2P5-201ENST00000457256 603 ntBASIC3.25□□□□□ -1.89
CIITAP33076 AL031183.1-201ENST00000457667 207 ntBASIC3.25□□□□□ -1.89
CIITAP33076 RNU7-167P-201ENST00000459160 62 ntBASIC3.25□□□□□ -1.89
CIITAP33076 AC117503.1-201ENST00000472241 394 ntBASIC3.25□□□□□ -1.89
CIITAP33076 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
CIITAP33076 AC104136.1-201ENST00000512969 394 ntBASIC3.25□□□□□ -1.89
CIITAP33076 RNU6-1069P-201ENST00000516612 133 ntBASIC3.25□□□□□ -1.89
CIITAP33076 RN7SKP282-201ENST00000516824 299 ntBASIC3.25□□□□□ -1.89
CIITAP33076 AL355375.2-201ENST00000574825 175 ntBASIC3.25□□□□□ -1.89
CIITAP33076 AC243960.4-201ENST00000600532 288 ntBASIC3.25□□□□□ -1.89
CIITAP33076 AC012119.1-201ENST00000603184 222 ntBASIC3.25□□□□□ -1.89
CIITAP33076 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.25□□□□□ -1.89
CIITAP33076 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.25□□□□□ -1.89
CIITAP33076 RMST_7.1-201ENST00000621935 268 ntBASIC3.25□□□□□ -1.89
CIITAP33076 AC073308.1-201ENST00000623696 305 ntBASIC3.25□□□□□ -1.89
CIITAP33076 AC022418.1-201ENST00000624118 445 ntBASIC3.25□□□□□ -1.89
CIITAP33076 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.25□□□□□ -1.89
CIITAP33076 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CIITAP33076 RNU6-1303P-201ENST00000364841 107 ntBASIC3.24□□□□□ -1.89
CIITAP33076 SNORA18.3-201ENST00000384122 132 ntBASIC3.24□□□□□ -1.89
CIITAP33076 RNU6-434P-201ENST00000384376 107 ntBASIC3.24□□□□□ -1.89
CIITAP33076 RNU6-45P-201ENST00000384471 107 ntBASIC3.24□□□□□ -1.89
CIITAP33076 RNA5SP252-201ENST00000391131 119 ntBASIC3.24□□□□□ -1.89
CIITAP33076 RNU2-33P-201ENST00000410344 192 ntBASIC3.24□□□□□ -1.89
CIITAP33076 PIGFP3-201ENST00000441918 722 ntBASIC3.24□□□□□ -1.89
CIITAP33076 NIPA2P5-201ENST00000452282 464 ntBASIC3.24□□□□□ -1.89
CIITAP33076 AC233279.1-201ENST00000455300 423 ntBASIC3.24□□□□□ -1.89
CIITAP33076 AC010099.1-201ENST00000455434 375 ntBASIC3.24□□□□□ -1.89
CIITAP33076 AC022493.1-201ENST00000492984 337 ntBASIC3.24□□□□□ -1.89
CIITAP33076 TBCAP3-201ENST00000512475 312 ntBASIC3.24□□□□□ -1.89
CIITAP33076 SNORA14.1-201ENST00000516113 141 ntBASIC3.24□□□□□ -1.89
CIITAP33076 AP000889.2-201ENST00000532684 490 ntBASIC3.24□□□□□ -1.89
CIITAP33076 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.24□□□□□ -1.89
CIITAP33076 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.24□□□□□ -1.89
CIITAP33076 LARP7P3-201ENST00000579888 337 ntBASIC3.24□□□□□ -1.89
CIITAP33076 MIR4513-201ENST00000581077 86 ntBASIC3.24□□□□□ -1.89
CIITAP33076 MIR5692C1-201ENST00000585309 91 ntBASIC3.24□□□□□ -1.89
CIITAP33076 AC090115.4-201ENST00000609970 188 ntBASIC3.24□□□□□ -1.89
CIITAP33076 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.24□□□□□ -1.89
CIITAP33076 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.24□□□□□ -1.89
CIITAP33076 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.24□□□□□ -1.89
CIITAP33076 AL137790.1-201ENST00000634283 177 ntBASIC3.24□□□□□ -1.89
CIITAP33076 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.24□□□□□ -1.89
CIITAP33076 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CIITAP33076 AC008669.1-201ENST00000565823 2178 ntBASIC3.24□□□□□ -1.89
CIITAP33076 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CIITAP33076 AC099654.7-201ENST00000635788 2127 ntBASIC3.23□□□□□ -1.89
CIITAP33076 SNORD113-7-201ENST00000363762 77 ntBASIC3.23□□□□□ -1.89
CIITAP33076 RPS4XP7-201ENST00000406274 780 ntBASIC3.23□□□□□ -1.89
CIITAP33076 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CIITAP33076 RNU2-3P-201ENST00000410144 191 ntBASIC3.23□□□□□ -1.89
CIITAP33076 RPL21P90-201ENST00000415692 466 ntBASIC3.23□□□□□ -1.89
CIITAP33076 RPLP0P7-201ENST00000416050 667 ntBASIC3.23□□□□□ -1.89
CIITAP33076 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.23□□□□□ -1.89
CIITAP33076 RPL37P6-201ENST00000460682 294 ntBASIC3.23□□□□□ -1.89
CIITAP33076 MTND4P17-201ENST00000470444 350 ntBASIC3.23□□□□□ -1.89
CIITAP33076 MTND3P25-201ENST00000509243 135 ntBASIC3.23□□□□□ -1.89
CIITAP33076 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.23□□□□□ -1.89
CIITAP33076 Y_RNA.675-201ENST00000516389 149 ntBASIC3.23□□□□□ -1.89
CIITAP33076 SNORA31.21-201ENST00000517180 77 ntBASIC3.23□□□□□ -1.89
CIITAP33076 SNORA25.17-201ENST00000517184 124 ntBASIC3.23□□□□□ -1.89
CIITAP33076 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.23□□□□□ -1.89
CIITAP33076 AP003122.3-201ENST00000526316 255 ntBASIC3.23□□□□□ -1.89
CIITAP33076 AC084851.1-201ENST00000529105 249 ntBASIC3.23□□□□□ -1.89
CIITAP33076 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CIITAP33076 CYCSP39-201ENST00000565821 309 ntBASIC3.23□□□□□ -1.89
CIITAP33076 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CIITAP33076 POLR3GP2-201ENST00000588366 668 ntBASIC3.23□□□□□ -1.89
CIITAP33076 AL353621.2-201ENST00000605340 133 ntBASIC3.23□□□□□ -1.89
CIITAP33076 AL050343.2-201ENST00000607338 280 ntBASIC3.23□□□□□ -1.89
CIITAP33076 AC104237.2-201ENST00000612456 443 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms