Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.03□□□□□ -2.4
CPS1P31327 RNA5SP361-201ENST00000362686 118 ntBASIC0.03□□□□□ -2.41
CPS1P31327 SNORD114-24-201ENST00000365029 72 ntBASIC0.03□□□□□ -2.41
CPS1P31327 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.03□□□□□ -2.41
CPS1P31327 MIR19B1-201ENST00000384829 87 ntBASIC0.03□□□□□ -2.41
CPS1P31327 RNA5SP100-201ENST00000410903 110 ntBASIC0.03□□□□□ -2.41
CPS1P31327 RNA5SP59-201ENST00000410922 110 ntBASIC0.03□□□□□ -2.41
CPS1P31327 MED14P1-201ENST00000430517 648 ntBASIC0.03□□□□□ -2.41
CPS1P31327 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.03□□□□□ -2.41
CPS1P31327 AC011406.1-201ENST00000512440 370 ntBASIC0.03□□□□□ -2.41
CPS1P31327 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.03□□□□□ -2.41
CPS1P31327 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.03□□□□□ -2.41
CPS1P31327 MIR4723-201ENST00000585070 81 ntBASIC0.03□□□□□ -2.41
CPS1P31327 Z83818.1-201ENST00000603584 150 ntBASIC0.03□□□□□ -2.41
CPS1P31327 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.03□□□□□ -2.41
CPS1P31327 MIR5739-201ENST00000619803 80 ntBASIC0.03□□□□□ -2.41
CPS1P31327 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.03□□□□□ -2.41
CPS1P31327 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.03□□□□□ -2.41
CPS1P31327 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
CPS1P31327 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
CPS1P31327 MIR561-201ENST00000385216 97 ntBASIC0.02□□□□□ -2.41
CPS1P31327 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.02□□□□□ -2.41
CPS1P31327 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.02□□□□□ -2.41
CPS1P31327 snoU13.11-201ENST00000459219 104 ntBASIC0.02□□□□□ -2.41
CPS1P31327 AC010631.1-201ENST00000474150 156 ntBASIC0.02□□□□□ -2.41
CPS1P31327 AL162730.1-201ENST00000605734 292 ntBASIC0.02□□□□□ -2.41
CPS1P31327 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.02□□□□□ -2.41
CPS1P31327 AC093913.1-201ENST00000614178 329 ntBASIC0.02□□□□□ -2.41
CPS1P31327 MIR8063-201ENST00000621930 81 ntBASIC0.02□□□□□ -2.41
CPS1P31327 MIR29C-201ENST00000385231 88 ntBASIC0.01□□□□□ -2.41
CPS1P31327 TAF9BP2-201ENST00000400856 499 ntBASIC0.01□□□□□ -2.41
CPS1P31327 AC096649.2-201ENST00000416186 393 ntBASIC0.01□□□□□ -2.41
CPS1P31327 EIF1P1-201ENST00000421436 341 ntBASIC0.01□□□□□ -2.41
CPS1P31327 MTCO2P12-201ENST00000427426 682 ntBASIC0.01□□□□□ -2.41
CPS1P31327 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.01□□□□□ -2.41
CPS1P31327 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.01□□□□□ -2.41
CPS1P31327 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.01□□□□□ -2.41
CPS1P31327 MIR548Y-201ENST00000582739 110 ntBASIC0.01□□□□□ -2.41
CPS1P31327 AC112220.3-201ENST00000605502 502 ntBASIC0.01□□□□□ -2.41
CPS1P31327 AC008498.1-201ENST00000613012 531 ntBASIC0.01□□□□□ -2.41
CPS1P31327 RNU2-49P-201ENST00000410666 184 ntBASIC0□□□□□ -2.41
CPS1P31327 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0□□□□□ -2.41
CPS1P31327 DDX3P2-201ENST00000446138 111 ntBASIC0□□□□□ -2.41
CPS1P31327 PTK2-220ENST00000520151 573 ntTSL 4 BASIC0□□□□□ -2.41
CPS1P31327 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0□□□□□ -2.41
CPS1P31327 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0□□□□□ -2.41
CPS1P31327 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0□□□□□ -2.41
CPS1P31327 AP001596.2-201ENST00000608410 312 ntBASIC0□□□□□ -2.41
CPS1P31327 MTND2P41-201ENST00000637599 773 ntBASIC0□□□□□ -2.41
CPS1P31327 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
CPS1P31327 MIR1267-201ENST00000408723 78 ntBASIC-0.01□□□□□ -2.41
CPS1P31327 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC-0.01□□□□□ -2.41
CPS1P31327 RPS15AP5-201ENST00000436276 388 ntBASIC-0.01□□□□□ -2.41
CPS1P31327 RPS29P8-201ENST00000445109 171 ntBASIC-0.01□□□□□ -2.41
CPS1P31327 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC-0.01□□□□□ -2.41
CPS1P31327 AC141557.1-201ENST00000540982 400 ntBASIC-0.01□□□□□ -2.41
CPS1P31327 AC091489.2-201ENST00000566263 604 ntBASIC-0.01□□□□□ -2.41
CPS1P31327 MIR3937-201ENST00000580135 106 ntBASIC-0.01□□□□□ -2.41
CPS1P31327 AC022432.1-201ENST00000595739 310 ntBASIC-0.01□□□□□ -2.41
CPS1P31327 AC009033.1-201ENST00000624279 431 ntBASIC-0.01□□□□□ -2.41
CPS1P31327 AC090625.1-201ENST00000357130 210 ntBASIC-0.02□□□□□ -2.41
CPS1P31327 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.02□□□□□ -2.41
CPS1P31327 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.02□□□□□ -2.41
CPS1P31327 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC-0.02□□□□□ -2.41
CPS1P31327 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC-0.02□□□□□ -2.41
CPS1P31327 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.02□□□□□ -2.41
CPS1P31327 MTND2P19-201ENST00000449129 1012 ntBASIC-0.02□□□□□ -2.41
CPS1P31327 AL049714.1-201ENST00000466686 347 ntBASIC-0.02□□□□□ -2.41
CPS1P31327 AC108729.1-201ENST00000487812 947 ntBASIC-0.02□□□□□ -2.41
CPS1P31327 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC-0.02□□□□□ -2.41
CPS1P31327 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC-0.02□□□□□ -2.41
CPS1P31327 POC1B-211ENST00000549504 581 ntTSL 5 BASIC-0.02□□□□□ -2.41
CPS1P31327 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC-0.02□□□□□ -2.41
CPS1P31327 MIR4504-201ENST00000577413 92 ntBASIC-0.02□□□□□ -2.41
CPS1P31327 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC-0.02□□□□□ -2.41
CPS1P31327 MIR4765-201ENST00000585007 77 ntBASIC-0.02□□□□□ -2.41
CPS1P31327 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC-0.02□□□□□ -2.41
CPS1P31327 AC007349.4-201ENST00000608114 532 ntBASIC-0.02□□□□□ -2.41
CPS1P31327 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
CPS1P31327 RNU6-48P-201ENST00000384161 107 ntBASIC-0.03□□□□□ -2.41
CPS1P31327 AC104164.3-201ENST00000467363 1258 ntBASIC-0.03□□□□□ -2.41
CPS1P31327 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC-0.03□□□□□ -2.41
CPS1P31327 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC-0.03□□□□□ -2.41
CPS1P31327 MIR4645-201ENST00000583158 77 ntBASIC-0.03□□□□□ -2.41
CPS1P31327 AL713866.2-201ENST00000603579 219 ntBASIC-0.03□□□□□ -2.41
CPS1P31327 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC-0.03□□□□□ -2.41
CPS1P31327 RMST_5.1-201ENST00000618704 126 ntBASIC-0.03□□□□□ -2.41
CPS1P31327 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
CPS1P31327 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC-0.03□□□□□ -2.41
CPS1P31327 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.03□□□□□ -2.41
CPS1P31327 RNU6-821P-201ENST00000390995 107 ntBASIC-0.03□□□□□ -2.41
CPS1P31327 RNU6-244P-201ENST00000391028 104 ntBASIC-0.03□□□□□ -2.41
CPS1P31327 RNU1-119P-201ENST00000391122 165 ntBASIC-0.03□□□□□ -2.41
CPS1P31327 RPL21P111-201ENST00000418453 477 ntBASIC-0.03□□□□□ -2.41
CPS1P31327 AC013267.1-201ENST00000458227 267 ntBASIC-0.03□□□□□ -2.41
CPS1P31327 RNA5SP67-201ENST00000516422 131 ntBASIC-0.03□□□□□ -2.41
CPS1P31327 AP003049.1-201ENST00000529418 457 ntBASIC-0.03□□□□□ -2.41
CPS1P31327 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC-0.03□□□□□ -2.41
CPS1P31327 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC-0.03□□□□□ -2.41
CPS1P31327 AC010738.1-201ENST00000604970 987 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms