Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CNGA1P29973 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CNGA1P29973 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CNGA1P29973 AC068647.1-201ENST00000489539 2265 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 RNU6-78P-201ENST00000362897 107 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 RNU5E-7P-201ENST00000365290 117 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 Y_RNA.339-201ENST00000365325 102 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 MT-TD-201ENST00000387419 68 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 MIR548K-201ENST00000408406 116 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 MIR1289-1-201ENST00000408836 144 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 AL117339.3-201ENST00000418733 162 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.85□□□□□ -1.79
CNGA1P29973 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.85□□□□□ -1.79
CNGA1P29973 RPS29P31-201ENST00000446147 164 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 AC092001.1-201ENST00000453012 261 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 AC013470.1-201ENST00000453438 462 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 RPL27AP5-201ENST00000469428 449 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.85□□□□□ -1.79
CNGA1P29973 AC096576.1-201ENST00000489014 359 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 MTND3P22-201ENST00000510932 243 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 AC109479.2-201ENST00000517842 174 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 AC026333.2-201ENST00000542164 106 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 AL121821.2-201ENST00000556081 394 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 RPS3AP23-202ENST00000574601 686 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.85□□□□□ -1.79
CNGA1P29973 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.85□□□□□ -1.79
CNGA1P29973 U4.7-201ENST00000638126 106 ntBASIC3.85□□□□□ -1.79
CNGA1P29973 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.84□□□□□ -1.79
CNGA1P29973 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CNGA1P29973 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.84□□□□□ -1.79
CNGA1P29973 MIR422A-201ENST00000362286 90 ntBASIC3.84□□□□□ -1.79
CNGA1P29973 Y_RNA.529-201ENST00000384586 119 ntBASIC3.84□□□□□ -1.79
CNGA1P29973 RNU2-49P-201ENST00000410666 184 ntBASIC3.84□□□□□ -1.79
CNGA1P29973 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.84□□□□□ -1.79
CNGA1P29973 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CNGA1P29973 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.84□□□□□ -1.79
CNGA1P29973 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.84□□□□□ -1.79
CNGA1P29973 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.84□□□□□ -1.79
CNGA1P29973 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CNGA1P29973 NIPA2P5-201ENST00000452282 464 ntBASIC3.84□□□□□ -1.79
CNGA1P29973 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CNGA1P29973 RNU6-581P-201ENST00000516214 105 ntBASIC3.84□□□□□ -1.79
CNGA1P29973 SNORA43.2-201ENST00000516652 128 ntBASIC3.84□□□□□ -1.79
CNGA1P29973 AC093331.1-201ENST00000521474 169 ntBASIC3.84□□□□□ -1.79
CNGA1P29973 AC104576.1-201ENST00000524225 88 ntBASIC3.84□□□□□ -1.79
CNGA1P29973 AC022080.3-201ENST00000544433 482 ntBASIC3.84□□□□□ -1.79
CNGA1P29973 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.84□□□□□ -1.79
CNGA1P29973 MIR4738-201ENST00000579134 87 ntBASIC3.84□□□□□ -1.79
CNGA1P29973 AC024153.1-201ENST00000603103 365 ntBASIC3.84□□□□□ -1.79
CNGA1P29973 AC064836.2-201ENST00000609491 462 ntBASIC3.84□□□□□ -1.79
CNGA1P29973 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.84□□□□□ -1.79
CNGA1P29973 AC138627.2-201ENST00000624202 601 ntBASIC3.84□□□□□ -1.79
CNGA1P29973 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CNGA1P29973 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
CNGA1P29973 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
CNGA1P29973 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.84□□□□□ -1.8
CNGA1P29973 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CNGA1P29973 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CNGA1P29973 PWAR6-201ENST00000552334 4618 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 RNU6-1280P-201ENST00000365211 107 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 Y_RNA.474-201ENST00000384341 102 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 RNU6-95P-201ENST00000384697 107 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 RNU1-101P-201ENST00000391171 127 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 AL078595.1-201ENST00000404458 226 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 AL139396.1-201ENST00000421137 167 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.83□□□□□ -1.8
CNGA1P29973 AL590632.1-201ENST00000424289 371 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 AC006026.2-201ENST00000457376 180 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 MTND5P5-201ENST00000503764 376 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 AC116655.1-201ENST00000508324 901 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 AC096745.1-201ENST00000509945 370 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 SNORD19.2-201ENST00000516978 73 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.83□□□□□ -1.8
CNGA1P29973 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.83□□□□□ -1.8
CNGA1P29973 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.83□□□□□ -1.8
CNGA1P29973 AC025281.1-201ENST00000567026 265 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 MIR4790-201ENST00000577799 79 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.83□□□□□ -1.8
CNGA1P29973 AC020895.1-201ENST00000595362 272 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 C8orf59P2-201ENST00000603441 271 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.83□□□□□ -1.8
CNGA1P29973 AC011890.2-201ENST00000613393 294 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 AC008669.1-201ENST00000565823 2178 ntBASIC3.83□□□□□ -1.8
CNGA1P29973 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CNGA1P29973 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNGA1P29973 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.82□□□□□ -1.8
CNGA1P29973 RNA5SP197-201ENST00000363357 119 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 RNU6-799P-201ENST00000363567 107 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 Y_RNA.356-201ENST00000365475 113 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 AL445529.1-201ENST00000398713 389 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 FTH1P15-201ENST00000406984 280 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 MIR548F5-201ENST00000408421 86 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNGA1P29973 AL645568.3-201ENST00000433683 316 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 AL161651.1-201ENST00000440882 223 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 AC025750.2-201ENST00000442609 450 ntBASIC3.82□□□□□ -1.8
CNGA1P29973 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms