Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 MIR29C-201ENST00000385231 88 ntBASIC1.52□□□□□ -2.17
HLA-DMAP28067 AL031779.1-201ENST00000415663 330 ntBASIC1.52□□□□□ -2.17
HLA-DMAP28067 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DMAP28067 AL356583.2-201ENST00000426536 280 ntBASIC1.52□□□□□ -2.17
HLA-DMAP28067 CALM2P2-201ENST00000428512 440 ntBASIC1.52□□□□□ -2.17
HLA-DMAP28067 RPL23AP30-201ENST00000432419 501 ntBASIC1.52□□□□□ -2.17
HLA-DMAP28067 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.52□□□□□ -2.17
HLA-DMAP28067 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DMAP28067 RPL7P43-201ENST00000478876 753 ntBASIC1.52□□□□□ -2.17
HLA-DMAP28067 AC140059.1-201ENST00000489238 361 ntBASIC1.52□□□□□ -2.17
HLA-DMAP28067 AC112204.1-201ENST00000502591 103 ntBASIC1.52□□□□□ -2.17
HLA-DMAP28067 RNU2-10P-201ENST00000516375 211 ntBASIC1.52□□□□□ -2.17
HLA-DMAP28067 RNU6-1315P-201ENST00000517187 99 ntBASIC1.52□□□□□ -2.17
HLA-DMAP28067 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DMAP28067 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.52□□□□□ -2.17
HLA-DMAP28067 AC022880.1-201ENST00000534017 973 ntBASIC1.52□□□□□ -2.17
HLA-DMAP28067 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DMAP28067 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DMAP28067 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HLA-DMAP28067 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DMAP28067 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.52□□□□□ -2.17
HLA-DMAP28067 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.52□□□□□ -2.17
HLA-DMAP28067 DEFB131E-202ENST00000602581 683 ntBASIC1.52□□□□□ -2.17
HLA-DMAP28067 AC087045.1-201ENST00000605856 382 ntBASIC1.52□□□□□ -2.17
HLA-DMAP28067 AP002360.4-201ENST00000606980 481 ntBASIC1.52□□□□□ -2.17
HLA-DMAP28067 AL031775.1-201ENST00000607014 887 ntBASIC1.52□□□□□ -2.17
HLA-DMAP28067 AL391262.2-201ENST00000622466 494 ntBASIC1.52□□□□□ -2.17
HLA-DMAP28067 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.52□□□□□ -2.17
HLA-DMAP28067 IGHVIII-44-202ENST00000636235 289 ntBASIC1.52□□□□□ -2.17
HLA-DMAP28067 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.52□□□□□ -2.17
HLA-DMAP28067 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HLA-DMAP28067 SNORA72.3-201ENST00000365074 132 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 MIR634-201ENST00000385208 97 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 MIR301A-201ENST00000385261 86 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 RNA5SP465-201ENST00000391195 109 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 POLHP1-201ENST00000411806 470 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 AL078601.1-201ENST00000444542 271 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.51□□□□□ -2.17
HLA-DMAP28067 AL583843.1-201ENST00000456070 346 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 RPL9P6-201ENST00000492764 598 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
HLA-DMAP28067 AC096745.1-201ENST00000509945 370 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 AC107393.1-201ENST00000512403 346 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 RNU6-677P-201ENST00000516914 101 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 AP005435.4-201ENST00000529514 284 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 DUXAP5-201ENST00000529668 529 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 ZNF321P-202ENST00000550843 495 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 AL157871.3-201ENST00000557231 293 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 MIR548AB-201ENST00000584917 84 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 AL158032.1-201ENST00000605401 106 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.51□□□□□ -2.17
HLA-DMAP28067 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 AC024940.5-201ENST00000622889 474 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 AC068787.1-201ENST00000623908 691 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 AC099654.13-201ENST00000639774 207 ntBASIC1.51□□□□□ -2.17
HLA-DMAP28067 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HLA-DMAP28067 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
HLA-DMAP28067 AL079342.1-201ENST00000401460 267 ntBASIC1.5□□□□□ -2.17
HLA-DMAP28067 AC010099.3-201ENST00000423896 409 ntBASIC1.5□□□□□ -2.17
HLA-DMAP28067 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DMAP28067 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.5□□□□□ -2.17
HLA-DMAP28067 AL356320.1-201ENST00000429616 163 ntBASIC1.5□□□□□ -2.17
HLA-DMAP28067 USP9YP15-201ENST00000442391 422 ntBASIC1.5□□□□□ -2.17
HLA-DMAP28067 AL360221.1-201ENST00000445989 335 ntBASIC1.5□□□□□ -2.17
HLA-DMAP28067 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DMAP28067 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.5□□□□□ -2.17
HLA-DMAP28067 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.5□□□□□ -2.17
HLA-DMAP28067 MTND1P12-201ENST00000455231 147 ntBASIC1.5□□□□□ -2.17
HLA-DMAP28067 BTF3P15-201ENST00000455606 336 ntBASIC1.5□□□□□ -2.17
HLA-DMAP28067 RNU7-125P-201ENST00000458760 62 ntBASIC1.5□□□□□ -2.17
HLA-DMAP28067 MTCYBP35-201ENST00000503630 1137 ntBASIC1.5□□□□□ -2.17
HLA-DMAP28067 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DMAP28067 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.5□□□□□ -2.17
HLA-DMAP28067 RBBP4P6-201ENST00000508098 202 ntBASIC1.5□□□□□ -2.17
HLA-DMAP28067 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DMAP28067 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
HLA-DMAP28067 SNORA44.1-201ENST00000517031 108 ntBASIC1.5□□□□□ -2.17
HLA-DMAP28067 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.5□□□□□ -2.17
HLA-DMAP28067 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DMAP28067 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.5□□□□□ -2.17
HLA-DMAP28067 AC092325.1-201ENST00000566449 554 ntBASIC1.5□□□□□ -2.17
HLA-DMAP28067 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DMAP28067 WISP1-OT1-201ENST00000602893 642 ntBASIC1.5□□□□□ -2.17
HLA-DMAP28067 AC103810.8-201ENST00000607347 118 ntBASIC1.5□□□□□ -2.17
HLA-DMAP28067 RNU6-87P-201ENST00000607561 108 ntBASIC1.5□□□□□ -2.17
HLA-DMAP28067 AC099842.1-201ENST00000619919 596 ntBASIC1.5□□□□□ -2.17
HLA-DMAP28067 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DMAP28067 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.5□□□□□ -2.17
HLA-DMAP28067 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DMAP28067 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HLA-DMAP28067 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HLA-DMAP28067 Y_RNA.33-201ENST00000362591 102 ntBASIC1.49□□□□□ -2.17
HLA-DMAP28067 RNU6-942P-201ENST00000363002 107 ntBASIC1.49□□□□□ -2.17
HLA-DMAP28067 RNU5E-5P-201ENST00000365379 116 ntBASIC1.49□□□□□ -2.17
HLA-DMAP28067 SNORA24.1-201ENST00000384401 135 ntBASIC1.49□□□□□ -2.17
HLA-DMAP28067 Y_RNA.560-201ENST00000384689 102 ntBASIC1.49□□□□□ -2.17
HLA-DMAP28067 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DMAP28067 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.49□□□□□ -2.17
HLA-DMAP28067 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms