Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC026371.1-201ENST00000551867 419 ntBASIC3.22□□□□□ -1.89
MMP8P22894 AL163153.1-201ENST00000554223 283 ntBASIC3.22□□□□□ -1.89
MMP8P22894 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.22□□□□□ -1.89
MMP8P22894 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.22□□□□□ -1.89
MMP8P22894 POLR3GP2-201ENST00000588366 668 ntBASIC3.22□□□□□ -1.89
MMP8P22894 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.22□□□□□ -1.89
MMP8P22894 SRGNP1-201ENST00000603392 451 ntBASIC3.22□□□□□ -1.89
MMP8P22894 AC016727.1-205ENST00000605437 569 ntBASIC3.22□□□□□ -1.89
MMP8P22894 AL359757.2-201ENST00000624309 274 ntBASIC3.22□□□□□ -1.89
MMP8P22894 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
MMP8P22894 AL021368.2-201ENST00000606125 5352 ntBASIC3.21□□□□□ -1.9
MMP8P22894 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
MMP8P22894 RNU4-79P-201ENST00000362764 141 ntBASIC3.21□□□□□ -1.9
MMP8P22894 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.21□□□□□ -1.9
MMP8P22894 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.21□□□□□ -1.9
MMP8P22894 RNU6-214P-201ENST00000384130 107 ntBASIC3.21□□□□□ -1.9
MMP8P22894 MIR888-201ENST00000401186 77 ntBASIC3.21□□□□□ -1.9
MMP8P22894 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.21□□□□□ -1.9
MMP8P22894 RPL5P18-201ENST00000406671 891 ntBASIC3.21□□□□□ -1.9
MMP8P22894 RNA5SP274-201ENST00000410484 108 ntBASIC3.21□□□□□ -1.9
MMP8P22894 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.21□□□□□ -1.9
MMP8P22894 AC074085.1-201ENST00000413598 418 ntBASIC3.21□□□□□ -1.9
MMP8P22894 NCOR1P3-201ENST00000420479 303 ntBASIC3.21□□□□□ -1.9
MMP8P22894 TOMM20P4-201ENST00000427861 435 ntBASIC3.21□□□□□ -1.9
MMP8P22894 RPS3AP52-201ENST00000435639 297 ntBASIC3.21□□□□□ -1.9
MMP8P22894 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.21□□□□□ -1.9
MMP8P22894 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.21□□□□□ -1.9
MMP8P22894 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.21□□□□□ -1.9
MMP8P22894 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.21□□□□□ -1.9
MMP8P22894 UBE2V1P7-201ENST00000446395 340 ntBASIC3.21□□□□□ -1.9
MMP8P22894 AC107399.1-201ENST00000451226 265 ntBASIC3.21□□□□□ -1.9
MMP8P22894 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.21□□□□□ -1.9
MMP8P22894 RPL26P9-201ENST00000457466 433 ntBASIC3.21□□□□□ -1.9
MMP8P22894 MTCO1P29-201ENST00000496868 288 ntBASIC3.21□□□□□ -1.9
MMP8P22894 RPS27P27-201ENST00000498779 255 ntBASIC3.21□□□□□ -1.9
MMP8P22894 MTND5P5-201ENST00000503764 376 ntBASIC3.21□□□□□ -1.9
MMP8P22894 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
MMP8P22894 RN7SKP43-201ENST00000516173 320 ntBASIC3.21□□□□□ -1.9
MMP8P22894 RNA5SP380-201ENST00000517190 98 ntBASIC3.21□□□□□ -1.9
MMP8P22894 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.21□□□□□ -1.9
MMP8P22894 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.21□□□□□ -1.9
MMP8P22894 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.21□□□□□ -1.9
MMP8P22894 AL391261.3-201ENST00000557194 520 ntBASIC3.21□□□□□ -1.9
MMP8P22894 AL645944.1-201ENST00000603857 493 ntBASIC3.21□□□□□ -1.9
MMP8P22894 ELOCP5-201ENST00000604924 333 ntBASIC3.21□□□□□ -1.9
MMP8P22894 AC107294.3-201ENST00000609211 526 ntBASIC3.21□□□□□ -1.9
MMP8P22894 AC064836.2-201ENST00000609491 462 ntBASIC3.21□□□□□ -1.9
MMP8P22894 AC135507.2-201ENST00000612443 309 ntBASIC3.21□□□□□ -1.9
MMP8P22894 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.21□□□□□ -1.9
MMP8P22894 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.2□□□□□ -1.9
MMP8P22894 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MMP8P22894 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MMP8P22894 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MMP8P22894 Y_RNA.135-201ENST00000363439 95 ntBASIC3.2□□□□□ -1.9
MMP8P22894 RNA5SP387-201ENST00000364226 106 ntBASIC3.2□□□□□ -1.9
MMP8P22894 RNU6-898P-201ENST00000365627 104 ntBASIC3.2□□□□□ -1.9
MMP8P22894 Y_RNA.535-201ENST00000384612 99 ntBASIC3.2□□□□□ -1.9
MMP8P22894 RNA5SP252-201ENST00000391131 119 ntBASIC3.2□□□□□ -1.9
MMP8P22894 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.2□□□□□ -1.9
MMP8P22894 RN7SKP220-201ENST00000410611 288 ntBASIC3.2□□□□□ -1.9
MMP8P22894 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.2□□□□□ -1.9
MMP8P22894 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.2□□□□□ -1.9
MMP8P22894 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.2□□□□□ -1.9
MMP8P22894 AC009969.1-201ENST00000438726 172 ntBASIC3.2□□□□□ -1.9
MMP8P22894 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.2□□□□□ -1.9
MMP8P22894 AC006445.1-201ENST00000491925 405 ntBASIC3.2□□□□□ -1.9
MMP8P22894 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.2□□□□□ -1.9
MMP8P22894 RPS27AP10-201ENST00000496103 208 ntBASIC3.2□□□□□ -1.9
MMP8P22894 AC079140.5-201ENST00000507882 310 ntBASIC3.2□□□□□ -1.9
MMP8P22894 Y_RNA.687-201ENST00000516558 91 ntBASIC3.2□□□□□ -1.9
MMP8P22894 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.2□□□□□ -1.9
MMP8P22894 GLYCAM1-201ENST00000546596 285 ntBASIC3.2□□□□□ -1.9
MMP8P22894 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.2□□□□□ -1.9
MMP8P22894 AC007151.1-201ENST00000572774 483 ntBASIC3.2□□□□□ -1.9
MMP8P22894 HMGN2P15-201ENST00000585707 270 ntBASIC3.2□□□□□ -1.9
MMP8P22894 AL355598.1-201ENST00000604169 202 ntBASIC3.2□□□□□ -1.9
MMP8P22894 AC113139.1-201ENST00000605049 239 ntBASIC3.2□□□□□ -1.9
MMP8P22894 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.2□□□□□ -1.9
MMP8P22894 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.2□□□□□ -1.9
MMP8P22894 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.2□□□□□ -1.9
MMP8P22894 AC007318.2-201ENST00000620999 243 ntBASIC3.2□□□□□ -1.9
MMP8P22894 AC006111.3-201ENST00000622137 383 ntBASIC3.2□□□□□ -1.9
MMP8P22894 AC138627.2-201ENST00000624202 601 ntBASIC3.2□□□□□ -1.9
MMP8P22894 AL035425.3-201ENST00000564206 4996 ntBASIC3.2□□□□□ -1.9
MMP8P22894 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.2□□□□□ -1.9
MMP8P22894 AC022336.2-201ENST00000568966 2538 ntBASIC3.2□□□□□ -1.9
MMP8P22894 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.2□□□□□ -1.9
MMP8P22894 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.19□□□□□ -1.9
MMP8P22894 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.19□□□□□ -1.9
MMP8P22894 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
MMP8P22894 MIR22-201ENST00000362190 85 ntBASIC3.19□□□□□ -1.9
MMP8P22894 RNU6-1329P-201ENST00000365664 107 ntBASIC3.19□□□□□ -1.9
MMP8P22894 Y_RNA.384-201ENST00000383909 102 ntBASIC3.19□□□□□ -1.9
MMP8P22894 RNU6-128P-201ENST00000383976 107 ntBASIC3.19□□□□□ -1.9
MMP8P22894 RNU6-95P-201ENST00000384697 107 ntBASIC3.19□□□□□ -1.9
MMP8P22894 MIR34A-201ENST00000385130 110 ntBASIC3.19□□□□□ -1.9
MMP8P22894 RNU6-1077P-201ENST00000410506 102 ntBASIC3.19□□□□□ -1.9
MMP8P22894 RPL37P10-201ENST00000412884 288 ntBASIC3.19□□□□□ -1.9
MMP8P22894 RPL26P27-201ENST00000414397 437 ntBASIC3.19□□□□□ -1.9
MMP8P22894 AL139396.1-201ENST00000421137 167 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms