Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.67□□□□□ -2.14
USF1P22415 AC138623.1-201ENST00000418060 216 ntBASIC1.67□□□□□ -2.14
USF1P22415 AC098592.1-201ENST00000419352 333 ntBASIC1.67□□□□□ -2.14
USF1P22415 AC137499.1-201ENST00000427602 88 ntBASIC1.67□□□□□ -2.14
USF1P22415 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.67□□□□□ -2.14
USF1P22415 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.67□□□□□ -2.14
USF1P22415 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.67□□□□□ -2.14
USF1P22415 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.67□□□□□ -2.14
USF1P22415 AC012308.1-201ENST00000451232 178 ntBASIC1.67□□□□□ -2.14
USF1P22415 KATNBL1P6-201ENST00000453433 915 ntBASIC1.67□□□□□ -2.14
USF1P22415 MTAPP1-201ENST00000489154 819 ntBASIC1.67□□□□□ -2.14
USF1P22415 AC109329.1-201ENST00000518744 317 ntBASIC1.67□□□□□ -2.14
USF1P22415 AC034114.1-201ENST00000520293 285 ntBASIC1.67□□□□□ -2.14
USF1P22415 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.67□□□□□ -2.14
USF1P22415 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.67□□□□□ -2.14
USF1P22415 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.67□□□□□ -2.14
USF1P22415 AC233702.2-202ENST00000562547 291 ntBASIC1.67□□□□□ -2.14
USF1P22415 PCMTD1P2-201ENST00000565017 355 ntBASIC1.67□□□□□ -2.14
USF1P22415 AC025678.1-201ENST00000567861 338 ntBASIC1.67□□□□□ -2.14
USF1P22415 RPL30P11-203ENST00000598995 310 ntBASIC1.67□□□□□ -2.14
USF1P22415 AL031274.2-201ENST00000599419 203 ntBASIC1.67□□□□□ -2.14
USF1P22415 AC073410.2-201ENST00000603240 332 ntBASIC1.67□□□□□ -2.14
USF1P22415 NDUFA8P1-201ENST00000605525 367 ntBASIC1.67□□□□□ -2.14
USF1P22415 AP000240.1-201ENST00000609910 452 ntBASIC1.67□□□□□ -2.14
USF1P22415 AC091932.3-201ENST00000624223 323 ntBASIC1.67□□□□□ -2.14
USF1P22415 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.67□□□□□ -2.14
USF1P22415 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
USF1P22415 RBBP8P1-201ENST00000449447 1844 ntBASIC1.66□□□□□ -2.14
USF1P22415 HAUS6P2-201ENST00000433254 2404 ntBASIC1.66□□□□□ -2.14
USF1P22415 RNU5E-1-201ENST00000362477 120 ntBASIC1.66□□□□□ -2.14
USF1P22415 RNU6-487P-201ENST00000365430 104 ntBASIC1.66□□□□□ -2.14
USF1P22415 RNU6-533P-201ENST00000384144 107 ntBASIC1.66□□□□□ -2.14
USF1P22415 RNU6-843P-201ENST00000384454 104 ntBASIC1.66□□□□□ -2.14
USF1P22415 SNORA40.19-201ENST00000390846 128 ntBASIC1.66□□□□□ -2.14
USF1P22415 AL591034.2-201ENST00000402839 359 ntBASIC1.66□□□□□ -2.14
USF1P22415 AL512604.1-201ENST00000404812 257 ntBASIC1.66□□□□□ -2.14
USF1P22415 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.66□□□□□ -2.14
USF1P22415 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.66□□□□□ -2.14
USF1P22415 AC027124.2-201ENST00000428249 105 ntBASIC1.66□□□□□ -2.14
USF1P22415 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.66□□□□□ -2.14
USF1P22415 AL627311.1-201ENST00000431514 115 ntBASIC1.66□□□□□ -2.14
USF1P22415 AL591719.1-201ENST00000444669 744 ntBASIC1.66□□□□□ -2.14
USF1P22415 NDUFB1P2-201ENST00000449477 176 ntBASIC1.66□□□□□ -2.14
USF1P22415 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USF1P22415 SNORD11.1-201ENST00000459482 85 ntBASIC1.66□□□□□ -2.14
USF1P22415 AC018868.1-201ENST00000491307 315 ntBASIC1.66□□□□□ -2.14
USF1P22415 Y_RNA.676-201ENST00000516393 96 ntBASIC1.66□□□□□ -2.14
USF1P22415 RNA5SP337-201ENST00000517007 109 ntBASIC1.66□□□□□ -2.14
USF1P22415 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
USF1P22415 MIR4287-201ENST00000579398 78 ntBASIC1.66□□□□□ -2.14
USF1P22415 AL359999.1-201ENST00000604513 294 ntBASIC1.66□□□□□ -2.14
USF1P22415 AC093788.1-201ENST00000609356 927 ntBASIC1.66□□□□□ -2.14
USF1P22415 AC016597.2-201ENST00000613256 341 ntBASIC1.66□□□□□ -2.14
USF1P22415 AC022202.1-201ENST00000613515 211 ntBASIC1.66□□□□□ -2.14
USF1P22415 AC008555.8-201ENST00000623602 2168 ntBASIC1.66□□□□□ -2.14
USF1P22415 RNU1-17P-201ENST00000363022 152 ntBASIC1.65□□□□□ -2.15
USF1P22415 SNORD56.2-201ENST00000363242 71 ntBASIC1.65□□□□□ -2.15
USF1P22415 RNU6-501P-201ENST00000364072 100 ntBASIC1.65□□□□□ -2.15
USF1P22415 Y_RNA.338-201ENST00000365320 114 ntBASIC1.65□□□□□ -2.15
USF1P22415 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.65□□□□□ -2.15
USF1P22415 AL139156.1-201ENST00000412785 841 ntBASIC1.65□□□□□ -2.15
USF1P22415 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.65□□□□□ -2.15
USF1P22415 AC008267.5-201ENST00000424928 265 ntBASIC1.65□□□□□ -2.15
USF1P22415 HMGN2P19-201ENST00000425149 265 ntBASIC1.65□□□□□ -2.15
USF1P22415 AL606517.1-201ENST00000446914 387 ntBASIC1.65□□□□□ -2.15
USF1P22415 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.65□□□□□ -2.15
USF1P22415 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.65□□□□□ -2.15
USF1P22415 MTCO2P29-201ENST00000465212 189 ntBASIC1.65□□□□□ -2.15
USF1P22415 HMGB1P30-201ENST00000492455 606 ntBASIC1.65□□□□□ -2.15
USF1P22415 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.65□□□□□ -2.15
USF1P22415 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.65□□□□□ -2.15
USF1P22415 RNU2-44P-201ENST00000516795 194 ntBASIC1.65□□□□□ -2.15
USF1P22415 RNU6-586P-201ENST00000517265 104 ntBASIC1.65□□□□□ -2.15
USF1P22415 AP004607.1-201ENST00000524456 203 ntBASIC1.65□□□□□ -2.15
USF1P22415 NDUFA5P6-201ENST00000542110 379 ntBASIC1.65□□□□□ -2.15
USF1P22415 AC135279.1-201ENST00000543493 504 ntBASIC1.65□□□□□ -2.15
USF1P22415 CR383656.8-201ENST00000549046 145 ntBASIC1.65□□□□□ -2.15
USF1P22415 AC110588.1-201ENST00000559699 137 ntBASIC1.65□□□□□ -2.15
USF1P22415 AC026271.5-201ENST00000577873 130 ntBASIC1.65□□□□□ -2.15
USF1P22415 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.65□□□□□ -2.15
USF1P22415 BNIP3P30-201ENST00000601184 574 ntBASIC1.65□□□□□ -2.15
USF1P22415 AP000942.3-201ENST00000603702 160 ntBASIC1.65□□□□□ -2.15
USF1P22415 AC098614.4-201ENST00000607601 462 ntBASIC1.65□□□□□ -2.15
USF1P22415 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.65□□□□□ -2.15
USF1P22415 AC006927.3-201ENST00000638789 384 ntBASIC1.65□□□□□ -2.15
USF1P22415 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.65□□□□□ -2.15
USF1P22415 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
USF1P22415 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.15
USF1P22415 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
USF1P22415 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
USF1P22415 RNU6-942P-201ENST00000363002 107 ntBASIC1.64□□□□□ -2.15
USF1P22415 RNU1-23P-201ENST00000363361 144 ntBASIC1.64□□□□□ -2.15
USF1P22415 U3.13-201ENST00000364804 214 ntBASIC1.64□□□□□ -2.15
USF1P22415 RNA5SP160-201ENST00000364866 120 ntBASIC1.64□□□□□ -2.15
USF1P22415 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
USF1P22415 RNU6-1032P-201ENST00000384100 107 ntBASIC1.64□□□□□ -2.15
USF1P22415 RNU6-72P-201ENST00000384285 79 ntBASIC1.64□□□□□ -2.15
USF1P22415 AL030996.1-201ENST00000411430 235 ntBASIC1.64□□□□□ -2.15
USF1P22415 CYCSP49-201ENST00000420810 319 ntBASIC1.64□□□□□ -2.15
USF1P22415 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms