Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.63□□□□□ -2.15
COL5A1P20908 AL590233.1-201ENST00000430017 456 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.63□□□□□ -2.15
COL5A1P20908 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL5A1P20908 RPL22P17-201ENST00000438729 315 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.63□□□□□ -2.15
COL5A1P20908 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.63□□□□□ -2.15
COL5A1P20908 AC005297.2-201ENST00000450430 606 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.63□□□□□ -2.15
COL5A1P20908 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.63□□□□□ -2.15
COL5A1P20908 AMD1P1-201ENST00000457220 922 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.63□□□□□ -2.15
COL5A1P20908 snoU109.4-201ENST00000458953 143 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 RPS29P20-201ENST00000489592 171 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.63□□□□□ -2.15
COL5A1P20908 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.63□□□□□ -2.15
COL5A1P20908 Y_RNA.672-201ENST00000516289 104 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 MTND1P5-201ENST00000517906 940 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.63□□□□□ -2.15
COL5A1P20908 AC124947.2-202ENST00000552735 133 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 ZNF519P2-201ENST00000557032 169 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.63□□□□□ -2.15
COL5A1P20908 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.63□□□□□ -2.15
COL5A1P20908 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
COL5A1P20908 AC107304.1-201ENST00000604229 296 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AL645939.4-201ENST00000604495 135 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AL161729.4-201ENST00000604650 476 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.63□□□□□ -2.15
COL5A1P20908 AC025594.3-201ENST00000613068 790 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 MIR6130-201ENST00000619419 109 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AC018755.4-201ENST00000619715 454 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 AC112204.3-201ENST00000623822 332 ntBASIC1.63□□□□□ -2.15
COL5A1P20908 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
COL5A1P20908 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
COL5A1P20908 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
COL5A1P20908 OR4G1P-203ENST00000641984 1631 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
COL5A1P20908 RNU6-1322P-201ENST00000364309 107 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 RNU6-297P-201ENST00000384636 107 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 AC127391.1-201ENST00000411737 98 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 USP9YP13-201ENST00000417797 480 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.62□□□□□ -2.15
COL5A1P20908 AC005094.1-201ENST00000440420 368 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 AL353572.1-201ENST00000442490 417 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 AL022238.1-201ENST00000442557 355 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.62□□□□□ -2.15
COL5A1P20908 AC093899.1-201ENST00000457984 376 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 TPT1P7-201ENST00000458300 517 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.62□□□□□ -2.15
COL5A1P20908 AC079382.1-201ENST00000493346 557 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 AC112204.1-201ENST00000502591 103 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 AC019235.1-201ENST00000503847 207 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 AC009901.1-201ENST00000506703 541 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 AC108078.1-201ENST00000508073 725 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 ATP5EP1-201ENST00000510257 156 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 AC009646.1-201ENST00000510455 318 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 RNU6-1178P-201ENST00000516674 107 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 Vault.3-201ENST00000516676 95 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.62□□□□□ -2.15
COL5A1P20908 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.62□□□□□ -2.15
COL5A1P20908 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.62□□□□□ -2.15
COL5A1P20908 MIR4801-201ENST00000582704 82 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 AC091965.4-201ENST00000607691 587 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 AC126118.1-201ENST00000607744 628 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 AL133173.2-201ENST00000614270 90 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 AL356585.4-201ENST00000623078 1229 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 AC079597.1-201ENST00000624306 508 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 AC009161.2-201ENST00000624626 138 ntBASIC1.62□□□□□ -2.15
COL5A1P20908 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.62□□□□□ -2.15
COL5A1P20908 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.62□□□□□ -2.15
COL5A1P20908 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
COL5A1P20908 AC092125.1-201ENST00000562568 1995 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 Y_RNA.46-201ENST00000362695 102 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 CD24P4-201ENST00000382840 243 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 RNU6-339P-201ENST00000384310 107 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 Y_RNA.493-201ENST00000384422 102 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
COL5A1P20908 AL356057.2-201ENST00000403318 432 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 RNA5SP489-201ENST00000410986 109 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.61□□□□□ -2.15
COL5A1P20908 BX295541.1-201ENST00000417774 250 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 ELOCP4-201ENST00000420090 333 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 BX510359.4-201ENST00000423750 193 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.61□□□□□ -2.15
COL5A1P20908 AC007283.2-201ENST00000424739 197 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.61□□□□□ -2.15
COL5A1P20908 MTCO2P11-201ENST00000431069 680 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 USP9YP12-201ENST00000450481 570 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.61□□□□□ -2.15
COL5A1P20908 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.61□□□□□ -2.15
COL5A1P20908 MTND1P12-201ENST00000455231 147 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.61□□□□□ -2.15
COL5A1P20908 AC104563.1-201ENST00000476147 376 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 RPL23AP41-201ENST00000484754 458 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.61□□□□□ -2.15
COL5A1P20908 AF213884.2-201ENST00000510417 903 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AC022483.1-201ENST00000514020 567 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.61□□□□□ -2.15
COL5A1P20908 AP001893.2-201ENST00000526949 202 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms