Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ERCC3P19447 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ERCC3P19447 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ERCC3P19447 AC032011.1-201ENST00000611703 1549 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 Y_RNA.148-201ENST00000363557 117 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 RNA5SP97-201ENST00000365006 84 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.53□□□□□ -1.68
ERCC3P19447 MIR544A-201ENST00000384855 91 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 AC074117.2-201ENST00000417130 397 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.53□□□□□ -1.68
ERCC3P19447 MRPS18CP6-201ENST00000423587 223 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 AC092423.1-201ENST00000430165 186 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 GSTA11P-201ENST00000452866 669 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 RNU7-23P-201ENST00000459465 62 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 AC107626.1-201ENST00000471084 183 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 RPL7P49-201ENST00000471402 708 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 AC006517.1-201ENST00000480485 328 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 SNORA25.10-201ENST00000515926 124 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 AC007991.1-201ENST00000522680 631 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 AC023442.1-201ENST00000531247 422 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.53□□□□□ -1.68
ERCC3P19447 AC010653.1-201ENST00000571108 881 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 AC092447.9-201ENST00000603395 144 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 7SK.7-201ENST00000603504 247 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 AL034408.1-202ENST00000636088 415 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 AC009093.8-201ENST00000641769 292 ntBASIC4.53□□□□□ -1.68
ERCC3P19447 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ERCC3P19447 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
ERCC3P19447 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.53□□□□□ -1.68
ERCC3P19447 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.53□□□□□ -1.68
ERCC3P19447 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.52□□□□□ -1.69
ERCC3P19447 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.52□□□□□ -1.69
ERCC3P19447 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
ERCC3P19447 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.52□□□□□ -1.69
ERCC3P19447 ZNF299P-201ENST00000406845 1804 ntBASIC4.52□□□□□ -1.69
ERCC3P19447 Y_RNA.252-201ENST00000364556 101 ntBASIC4.52□□□□□ -1.69
ERCC3P19447 SNORA5A-201ENST00000384111 134 ntBASIC4.52□□□□□ -1.69
ERCC3P19447 RNU6-1160P-201ENST00000384546 104 ntBASIC4.52□□□□□ -1.69
ERCC3P19447 Z98941.1-201ENST00000407764 100 ntBASIC4.52□□□□□ -1.69
ERCC3P19447 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.52□□□□□ -1.69
ERCC3P19447 EIF4EP2-201ENST00000422816 654 ntBASIC4.52□□□□□ -1.69
ERCC3P19447 AC018865.2-201ENST00000423631 129 ntBASIC4.52□□□□□ -1.69
ERCC3P19447 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.52□□□□□ -1.69
ERCC3P19447 AC099799.1-201ENST00000439809 192 ntBASIC4.52□□□□□ -1.69
ERCC3P19447 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.52□□□□□ -1.69
ERCC3P19447 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.52□□□□□ -1.69
ERCC3P19447 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.52□□□□□ -1.69
ERCC3P19447 RN7SL585P-201ENST00000470538 280 ntBASIC4.52□□□□□ -1.69
ERCC3P19447 HMGN1P10-201ENST00000474557 553 ntBASIC4.52□□□□□ -1.69
ERCC3P19447 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.52□□□□□ -1.69
ERCC3P19447 SCARNA14-201ENST00000516903 136 ntBASIC4.52□□□□□ -1.69
ERCC3P19447 CR383656.8-201ENST00000549046 145 ntBASIC4.52□□□□□ -1.69
ERCC3P19447 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ERCC3P19447 MIR4474-201ENST00000579189 78 ntBASIC4.52□□□□□ -1.69
ERCC3P19447 MIR5047-201ENST00000579212 100 ntBASIC4.52□□□□□ -1.69
ERCC3P19447 AC008737.2-201ENST00000599446 118 ntBASIC4.52□□□□□ -1.69
ERCC3P19447 AP001836.1-201ENST00000604675 523 ntBASIC4.52□□□□□ -1.69
ERCC3P19447 AL355802.3-201ENST00000607571 545 ntBASIC4.52□□□□□ -1.69
ERCC3P19447 AC005014.2-201ENST00000607795 599 ntBASIC4.52□□□□□ -1.69
ERCC3P19447 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
ERCC3P19447 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.52□□□□□ -1.69
ERCC3P19447 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ERCC3P19447 AC010733.2-201ENST00000589496 5702 ntBASIC4.51□□□□□ -1.69
ERCC3P19447 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
ERCC3P19447 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
ERCC3P19447 RNY1P14-201ENST00000384426 108 ntBASIC4.51□□□□□ -1.69
ERCC3P19447 RNU6-19P-201ENST00000384718 107 ntBASIC4.51□□□□□ -1.69
ERCC3P19447 RNU6-700P-201ENST00000391043 107 ntBASIC4.51□□□□□ -1.69
ERCC3P19447 AC023141.4-201ENST00000412031 328 ntBASIC4.51□□□□□ -1.69
ERCC3P19447 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.51□□□□□ -1.69
ERCC3P19447 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.51□□□□□ -1.69
ERCC3P19447 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.51□□□□□ -1.69
ERCC3P19447 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.51□□□□□ -1.69
ERCC3P19447 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.51□□□□□ -1.69
ERCC3P19447 AC243964.1-201ENST00000441814 261 ntBASIC4.51□□□□□ -1.69
ERCC3P19447 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.51□□□□□ -1.69
ERCC3P19447 AC026726.1-201ENST00000512859 601 ntBASIC4.51□□□□□ -1.69
ERCC3P19447 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.51□□□□□ -1.69
ERCC3P19447 MIR1244-1-201ENST00000612829 85 ntBASIC4.51□□□□□ -1.69
ERCC3P19447 MIR1244-3-201ENST00000635744 85 ntBASIC4.51□□□□□ -1.69
ERCC3P19447 MIR1244-2-201ENST00000636449 85 ntBASIC4.51□□□□□ -1.69
ERCC3P19447 MIR1244-4-202ENST00000636813 85 ntBASIC4.51□□□□□ -1.69
ERCC3P19447 MIR3529-201ENST00000637713 78 ntBASIC4.51□□□□□ -1.69
ERCC3P19447 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
ERCC3P19447 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ERCC3P19447 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ERCC3P19447 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
ERCC3P19447 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
ERCC3P19447 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.5□□□□□ -1.69
ERCC3P19447 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ERCC3P19447 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.5□□□□□ -1.69
ERCC3P19447 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ERCC3P19447 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ERCC3P19447 Y_RNA.459-201ENST00000384251 102 ntBASIC4.5□□□□□ -1.69
ERCC3P19447 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
ERCC3P19447 AL133475.1-201ENST00000404414 305 ntBASIC4.5□□□□□ -1.69
ERCC3P19447 RNU6-1156P-201ENST00000410365 100 ntBASIC4.5□□□□□ -1.69
ERCC3P19447 RNA5SP306-201ENST00000411087 107 ntBASIC4.5□□□□□ -1.69
ERCC3P19447 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.5□□□□□ -1.69
ERCC3P19447 PRSS3P4-201ENST00000453323 162 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms