Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
UBCP0CG48 CALM1P1-201ENST00000442082 433 ntBASIC1.61□□□□□ -2.15
UBCP0CG48 AL009048.1-201ENST00000450437 298 ntBASIC1.61□□□□□ -2.15
UBCP0CG48 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.61□□□□□ -2.15
UBCP0CG48 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
UBCP0CG48 AC107393.1-201ENST00000512403 346 ntBASIC1.61□□□□□ -2.15
UBCP0CG48 PTP4A1P4-201ENST00000512479 322 ntBASIC1.61□□□□□ -2.15
UBCP0CG48 SNORA31.23-201ENST00000517219 133 ntBASIC1.61□□□□□ -2.15
UBCP0CG48 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.61□□□□□ -2.15
UBCP0CG48 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.61□□□□□ -2.15
UBCP0CG48 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.61□□□□□ -2.15
UBCP0CG48 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.61□□□□□ -2.15
UBCP0CG48 GNAI2P1-201ENST00000541815 315 ntBASIC1.61□□□□□ -2.15
UBCP0CG48 AC018630.3-201ENST00000542637 96 ntBASIC1.61□□□□□ -2.15
UBCP0CG48 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.61□□□□□ -2.15
UBCP0CG48 HSBP1P1-201ENST00000555205 166 ntBASIC1.61□□□□□ -2.15
UBCP0CG48 AC074050.1-201ENST00000563247 211 ntBASIC1.61□□□□□ -2.15
UBCP0CG48 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.61□□□□□ -2.15
UBCP0CG48 MIR3618-201ENST00000580330 88 ntBASIC1.61□□□□□ -2.15
UBCP0CG48 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.61□□□□□ -2.15
UBCP0CG48 SNRPGP19-201ENST00000603826 189 ntBASIC1.61□□□□□ -2.15
UBCP0CG48 SEPT7P9-203ENST00000604116 343 ntBASIC1.61□□□□□ -2.15
UBCP0CG48 Z82243.1-201ENST00000609432 473 ntBASIC1.61□□□□□ -2.15
UBCP0CG48 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.61□□□□□ -2.15
UBCP0CG48 AL590808.1-201ENST00000618696 141 ntBASIC1.61□□□□□ -2.15
UBCP0CG48 U1.36-201ENST00000620684 176 ntBASIC1.61□□□□□ -2.15
UBCP0CG48 OR4G2P-201ENST00000328113 903 ntBASIC1.6□□□□□ -2.15
UBCP0CG48 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
UBCP0CG48 RNU6-809P-201ENST00000384461 107 ntBASIC1.6□□□□□ -2.15
UBCP0CG48 SNORD116-20-201ENST00000384529 92 ntBASIC1.6□□□□□ -2.15
UBCP0CG48 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
UBCP0CG48 SRIP3-201ENST00000413200 219 ntBASIC1.6□□□□□ -2.15
UBCP0CG48 Z98742.3-201ENST00000418637 326 ntBASIC1.6□□□□□ -2.15
UBCP0CG48 AL445685.2-201ENST00000422551 342 ntBASIC1.6□□□□□ -2.15
UBCP0CG48 UBE2V1P4-201ENST00000425374 344 ntBASIC1.6□□□□□ -2.15
UBCP0CG48 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.6□□□□□ -2.15
UBCP0CG48 AL365400.1-201ENST00000431854 640 ntBASIC1.6□□□□□ -2.15
UBCP0CG48 AL139415.2-201ENST00000431968 163 ntBASIC1.6□□□□□ -2.15
UBCP0CG48 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.6□□□□□ -2.15
UBCP0CG48 HSPE1P21-201ENST00000438283 308 ntBASIC1.6□□□□□ -2.15
UBCP0CG48 AC006026.2-201ENST00000457376 180 ntBASIC1.6□□□□□ -2.15
UBCP0CG48 AC087884.1-201ENST00000469738 328 ntBASIC1.6□□□□□ -2.15
UBCP0CG48 AC098799.1-201ENST00000504752 800 ntBASIC1.6□□□□□ -2.15
UBCP0CG48 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.6□□□□□ -2.15
UBCP0CG48 MIR548AC-201ENST00000585049 88 ntBASIC1.6□□□□□ -2.15
UBCP0CG48 AL353778.1-201ENST00000603149 408 ntBASIC1.6□□□□□ -2.15
UBCP0CG48 AL031281.1-201ENST00000604049 488 ntBASIC1.6□□□□□ -2.15
UBCP0CG48 AC010608.3-201ENST00000625048 527 ntBASIC1.6□□□□□ -2.15
UBCP0CG48 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.6□□□□□ -2.15
UBCP0CG48 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.15
UBCP0CG48 Y_RNA.40-201ENST00000362645 93 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 MIR29B2-201ENST00000385055 81 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 SNORD115.1-201ENST00000391109 76 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 RNU11-3P-201ENST00000391111 133 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 UBE2V1P2-201ENST00000397758 440 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 AC019129.1-201ENST00000403786 261 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 RN7SKP192-201ENST00000411291 327 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 RPL23AP39-201ENST00000415533 405 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 IFNA20P-201ENST00000436840 528 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 AC118469.1-201ENST00000442943 488 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 RPL38P4-201ENST00000502376 214 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 AC112204.1-201ENST00000502591 103 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.59□□□□□ -2.15
UBCP0CG48 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.59□□□□□ -2.15
UBCP0CG48 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.59□□□□□ -2.15
UBCP0CG48 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.59□□□□□ -2.15
UBCP0CG48 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.59□□□□□ -2.15
UBCP0CG48 ZNF519P3-201ENST00000557158 1032 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 AC090888.2-201ENST00000559765 1144 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 MIR4419B-201ENST00000577260 68 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 AC012065.4-201ENST00000602445 679 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 AC103810.8-201ENST00000607347 118 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 AC004908.3-201ENST00000610248 625 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 AC064859.1-201ENST00000624741 174 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 AC092192.1-201ENST00000633154 1018 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.59□□□□□ -2.15
UBCP0CG48 AL391994.1-201ENST00000254724 282 ntBASIC1.58□□□□□ -2.16
UBCP0CG48 SNORD56.2-201ENST00000363242 71 ntBASIC1.58□□□□□ -2.16
UBCP0CG48 RNU6-1200P-201ENST00000384162 107 ntBASIC1.58□□□□□ -2.16
UBCP0CG48 SNORA3.2-201ENST00000408221 125 ntBASIC1.58□□□□□ -2.16
UBCP0CG48 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.58□□□□□ -2.16
UBCP0CG48 RPS20P15-201ENST00000412792 311 ntBASIC1.58□□□□□ -2.16
UBCP0CG48 MTCO2P23-201ENST00000425216 680 ntBASIC1.58□□□□□ -2.16
UBCP0CG48 AC137499.1-201ENST00000427602 88 ntBASIC1.58□□□□□ -2.16
UBCP0CG48 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.58□□□□□ -2.16
UBCP0CG48 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.58□□□□□ -2.16
UBCP0CG48 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.58□□□□□ -2.16
UBCP0CG48 BZW1P2-201ENST00000473537 826 ntBASIC1.58□□□□□ -2.16
UBCP0CG48 RNA5SP337-201ENST00000517007 109 ntBASIC1.58□□□□□ -2.16
UBCP0CG48 MTND4LP18-201ENST00000526864 291 ntBASIC1.58□□□□□ -2.16
UBCP0CG48 CBX3P4-201ENST00000538909 354 ntBASIC1.58□□□□□ -2.16
UBCP0CG48 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.58□□□□□ -2.16
UBCP0CG48 ADI1P3-201ENST00000549509 470 ntBASIC1.58□□□□□ -2.16
UBCP0CG48 MIR4435-1-201ENST00000582552 80 ntBASIC1.58□□□□□ -2.16
UBCP0CG48 AC010928.2-201ENST00000588017 287 ntBASIC1.58□□□□□ -2.16
UBCP0CG48 AC012409.4-201ENST00000612923 249 ntBASIC1.58□□□□□ -2.16
UBCP0CG48 AC099842.1-201ENST00000619919 596 ntBASIC1.58□□□□□ -2.16
UBCP0CG48 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.58□□□□□ -2.16
UBCP0CG48 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
UBCP0CG48 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms