Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.66□□□□□ -1.98
RAF1P04049 AL136360.1-201ENST00000503377 1900 ntBASIC2.66□□□□□ -1.98
RAF1P04049 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
RAF1P04049 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
RAF1P04049 MTND4P35-201ENST00000604257 1375 ntBASIC2.65□□□□□ -1.98
RAF1P04049 AP003122.5-201ENST00000527668 3766 ntBASIC2.65□□□□□ -1.99
RAF1P04049 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.65□□□□□ -1.99
RAF1P04049 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RAF1P04049 RNU6-778P-201ENST00000363269 103 ntBASIC2.65□□□□□ -1.99
RAF1P04049 SNORA72.1-201ENST00000363485 129 ntBASIC2.65□□□□□ -1.99
RAF1P04049 Y_RNA.160-201ENST00000363677 92 ntBASIC2.65□□□□□ -1.99
RAF1P04049 RNU6-522P-201ENST00000364497 107 ntBASIC2.65□□□□□ -1.99
RAF1P04049 RNU6-715P-201ENST00000365204 103 ntBASIC2.65□□□□□ -1.99
RAF1P04049 Y_RNA.378-201ENST00000365652 113 ntBASIC2.65□□□□□ -1.99
RAF1P04049 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
RAF1P04049 RNU6-658P-201ENST00000384606 106 ntBASIC2.65□□□□□ -1.99
RAF1P04049 SNORA16.2-201ENST00000390991 127 ntBASIC2.65□□□□□ -1.99
RAF1P04049 SNORD70.1-201ENST00000391007 85 ntBASIC2.65□□□□□ -1.99
RAF1P04049 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.65□□□□□ -1.99
RAF1P04049 RNU2-49P-201ENST00000410666 184 ntBASIC2.65□□□□□ -1.99
RAF1P04049 RPL19P1-201ENST00000411635 428 ntBASIC2.65□□□□□ -1.99
RAF1P04049 RPL26P27-201ENST00000414397 437 ntBASIC2.65□□□□□ -1.99
RAF1P04049 AL451074.5-201ENST00000415894 435 ntBASIC2.65□□□□□ -1.99
RAF1P04049 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.65□□□□□ -1.99
RAF1P04049 OOSP1P1-201ENST00000423265 274 ntBASIC2.65□□□□□ -1.99
RAF1P04049 AL353729.1-201ENST00000425044 720 ntBASIC2.65□□□□□ -1.99
RAF1P04049 RPL23AP58-201ENST00000440453 469 ntBASIC2.65□□□□□ -1.99
RAF1P04049 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.65□□□□□ -1.99
RAF1P04049 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.65□□□□□ -1.99
RAF1P04049 RPL21P41-201ENST00000459863 264 ntBASIC2.65□□□□□ -1.99
RAF1P04049 HMGN2P26-201ENST00000463169 339 ntBASIC2.65□□□□□ -1.99
RAF1P04049 RPS15AP34-201ENST00000487776 387 ntBASIC2.65□□□□□ -1.99
RAF1P04049 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.65□□□□□ -1.99
RAF1P04049 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.65□□□□□ -1.99
RAF1P04049 AC025465.4-201ENST00000513422 638 ntBASIC2.65□□□□□ -1.99
RAF1P04049 AC022634.1-201ENST00000520765 532 ntBASIC2.65□□□□□ -1.99
RAF1P04049 AP003122.3-201ENST00000526316 255 ntBASIC2.65□□□□□ -1.99
RAF1P04049 CENPUP1-201ENST00000526649 1202 ntBASIC2.65□□□□□ -1.99
RAF1P04049 AC084851.1-201ENST00000529105 249 ntBASIC2.65□□□□□ -1.99
RAF1P04049 AC023050.3-201ENST00000541142 333 ntBASIC2.65□□□□□ -1.99
RAF1P04049 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
RAF1P04049 MIR3945-201ENST00000581853 98 ntBASIC2.65□□□□□ -1.99
RAF1P04049 AP000787.2-201ENST00000604432 568 ntBASIC2.65□□□□□ -1.99
RAF1P04049 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
RAF1P04049 U6.42-201ENST00000618440 107 ntBASIC2.65□□□□□ -1.99
RAF1P04049 AC092794.2-201ENST00000620933 563 ntBASIC2.65□□□□□ -1.99
RAF1P04049 UCA1.1-201ENST00000620952 75 ntBASIC2.65□□□□□ -1.99
RAF1P04049 AC090617.10-201ENST00000624308 134 ntBASIC2.65□□□□□ -1.99
RAF1P04049 AP003400.5-201ENST00000624827 617 ntBASIC2.65□□□□□ -1.99
RAF1P04049 U2.21-201ENST00000637295 81 ntBASIC2.65□□□□□ -1.99
RAF1P04049 AC100810.6-201ENST00000638068 285 ntBASIC2.65□□□□□ -1.99
RAF1P04049 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
RAF1P04049 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
RAF1P04049 MIR22-201ENST00000362190 85 ntBASIC2.64□□□□□ -1.99
RAF1P04049 Y_RNA.167-201ENST00000363735 109 ntBASIC2.64□□□□□ -1.99
RAF1P04049 RNU6-867P-201ENST00000364956 107 ntBASIC2.64□□□□□ -1.99
RAF1P04049 SNORD21-201ENST00000383953 95 ntBASIC2.64□□□□□ -1.99
RAF1P04049 SNORA54-201ENST00000384281 123 ntBASIC2.64□□□□□ -1.99
RAF1P04049 MIR578-201ENST00000384828 96 ntBASIC2.64□□□□□ -1.99
RAF1P04049 RNU6-1148P-201ENST00000410992 104 ntBASIC2.64□□□□□ -1.99
RAF1P04049 RNA5SP184-201ENST00000411071 108 ntBASIC2.64□□□□□ -1.99
RAF1P04049 AC022028.1-201ENST00000412054 408 ntBASIC2.64□□□□□ -1.99
RAF1P04049 NDUFS5P4-201ENST00000412983 318 ntBASIC2.64□□□□□ -1.99
RAF1P04049 RPL21P111-201ENST00000418453 477 ntBASIC2.64□□□□□ -1.99
RAF1P04049 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.64□□□□□ -1.99
RAF1P04049 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.64□□□□□ -1.99
RAF1P04049 RPS29P6-201ENST00000438196 145 ntBASIC2.64□□□□□ -1.99
RAF1P04049 AC009296.1-201ENST00000443146 155 ntBASIC2.64□□□□□ -1.99
RAF1P04049 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.64□□□□□ -1.99
RAF1P04049 MTND3P10-201ENST00000450967 341 ntBASIC2.64□□□□□ -1.99
RAF1P04049 TRBV1-201ENST00000476502 284 ntBASIC2.64□□□□□ -1.99
RAF1P04049 AC083906.5-201ENST00000503722 328 ntBASIC2.64□□□□□ -1.99
RAF1P04049 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.64□□□□□ -1.99
RAF1P04049 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.64□□□□□ -1.99
RAF1P04049 Y_RNA.665-201ENST00000516177 98 ntBASIC2.64□□□□□ -1.99
RAF1P04049 RNU6-1315P-201ENST00000517187 99 ntBASIC2.64□□□□□ -1.99
RAF1P04049 ELOCP31-201ENST00000540463 467 ntBASIC2.64□□□□□ -1.99
RAF1P04049 BNIP3P6-201ENST00000549284 499 ntBASIC2.64□□□□□ -1.99
RAF1P04049 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.64□□□□□ -1.99
RAF1P04049 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.64□□□□□ -1.99
RAF1P04049 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RAF1P04049 AC018638.8-201ENST00000588755 281 ntBASIC2.64□□□□□ -1.99
RAF1P04049 AC005498.1-201ENST00000592125 465 ntBASIC2.64□□□□□ -1.99
RAF1P04049 AL355598.1-201ENST00000604169 202 ntBASIC2.64□□□□□ -1.99
RAF1P04049 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.64□□□□□ -1.99
RAF1P04049 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RAF1P04049 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.64□□□□□ -1.99
RAF1P04049 AC099654.7-201ENST00000635788 2127 ntBASIC2.63□□□□□ -1.99
RAF1P04049 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
RAF1P04049 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.63□□□□□ -1.99
RAF1P04049 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RAF1P04049 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RAF1P04049 Y_RNA.279-201ENST00000364763 95 ntBASIC2.63□□□□□ -1.99
RAF1P04049 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RAF1P04049 RNU6-393P-201ENST00000384475 107 ntBASIC2.63□□□□□ -1.99
RAF1P04049 MIR301A-201ENST00000385261 86 ntBASIC2.63□□□□□ -1.99
RAF1P04049 AL162578.1-201ENST00000406202 378 ntBASIC2.63□□□□□ -1.99
RAF1P04049 AC023141.4-201ENST00000412031 328 ntBASIC2.63□□□□□ -1.99
RAF1P04049 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.63□□□□□ -1.99
RAF1P04049 BPY2DP-201ENST00000422208 265 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms