Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 GLUD1P4-201ENST00000590914 418 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 AC006006.1-201ENST00000603082 144 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 AC123786.2-201ENST00000603459 275 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 AL670379.11-201ENST00000604059 253 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 AL355598.1-201ENST00000604169 202 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 AL670379.10-201ENST00000604330 253 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 AC106900.2-201ENST00000604994 317 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 AL670379.12-201ENST00000605291 253 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 AL670379.9-201ENST00000605428 253 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 AL355816.1-201ENST00000607951 118 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 AC009318.2-201ENST00000610917 651 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 SCARNA17.4-201ENST00000614296 143 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.7□□□□□ -1.98
COL2A1P02458 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
COL2A1P02458 RNU6-108P-201ENST00000365558 107 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 RNU6-38P-201ENST00000384085 107 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
COL2A1P02458 RNU6-907P-201ENST00000390924 102 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 MIR548F5-201ENST00000408421 86 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 AC114491.1-201ENST00000416095 246 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.7□□□□□ -1.98
COL2A1P02458 MTCO2P27-201ENST00000420740 428 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.7□□□□□ -1.98
COL2A1P02458 RNU6-333P-201ENST00000459117 107 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 AC130509.1-201ENST00000464158 433 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 AL049714.1-201ENST00000466686 347 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 MTATP8P1-201ENST00000467115 207 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 RPL23AP42-201ENST00000471152 471 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 AC104563.1-201ENST00000476147 376 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 TRBVA-201ENST00000498804 316 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.7□□□□□ -1.98
COL2A1P02458 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.7□□□□□ -1.98
COL2A1P02458 AC108729.3-201ENST00000513484 108 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 RNU6-1213P-201ENST00000517075 94 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 ZNF705CP-201ENST00000530515 889 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 APOOP3-201ENST00000536787 586 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.7□□□□□ -1.98
COL2A1P02458 OR4T1P-201ENST00000554933 911 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 AL118558.2-201ENST00000556294 238 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.7□□□□□ -1.98
COL2A1P02458 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.7□□□□□ -1.98
COL2A1P02458 MIR5583-1-201ENST00000580941 59 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 MIR4503-201ENST00000582187 83 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 MIR4781-201ENST00000585250 76 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 AL136313.1-201ENST00000624804 202 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.7□□□□□ -1.98
COL2A1P02458 CDC27P3-201ENST00000635418 1910 ntBASIC2.7□□□□□ -1.98
COL2A1P02458 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL2A1P02458 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
COL2A1P02458 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
COL2A1P02458 Y_RNA.100-201ENST00000363141 102 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 RNU6-1097P-201ENST00000363586 107 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 Y_RNA.367-201ENST00000365544 101 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 Y_RNA.378-201ENST00000365652 113 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 RNU6-14P-201ENST00000384630 106 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 RNA5SP344-201ENST00000411081 104 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 HSPE1P1-201ENST00000421494 318 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.69□□□□□ -1.98
COL2A1P02458 BEND7P1-201ENST00000422058 457 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 AC093106.2-201ENST00000428212 385 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 RPL36AP6-201ENST00000435770 321 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 USP9YP7-201ENST00000436723 430 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 AL118520.1-201ENST00000450770 291 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 USP9YP32-201ENST00000452432 430 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 RPL30P15-201ENST00000457129 321 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 AP1S2P1-201ENST00000457344 379 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 AL162395.1-201ENST00000457882 422 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 AL049830.2-201ENST00000480072 201 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 AC116337.1-201ENST00000509680 687 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 AC093303.1-201ENST00000514549 295 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 Y_RNA.665-201ENST00000516177 98 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 Y_RNA.691-201ENST00000516611 103 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.69□□□□□ -1.98
COL2A1P02458 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.69□□□□□ -1.98
COL2A1P02458 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.69□□□□□ -1.98
COL2A1P02458 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.69□□□□□ -1.98
COL2A1P02458 AC068790.3-201ENST00000602988 553 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 7SK.10-201ENST00000621414 298 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 AC244517.12-201ENST00000623581 663 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 AC138305.3-201ENST00000624988 240 ntBASIC2.69□□□□□ -1.98
COL2A1P02458 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.69□□□□□ -1.98
COL2A1P02458 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
COL2A1P02458 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.69□□□□□ -1.98
COL2A1P02458 Y_RNA.22-201ENST00000362492 102 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 Y_RNA.133-201ENST00000363428 110 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 Y_RNA.145-201ENST00000363527 102 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 Y_RNA.355-201ENST00000365462 98 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.68□□□□□ -1.98
COL2A1P02458 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
COL2A1P02458 RNU6-1293P-201ENST00000384077 107 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 Y_RNA.473-201ENST00000384333 102 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 RNU6-463P-201ENST00000384340 107 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 RNU6-1105P-201ENST00000384774 107 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 RNU6-903P-201ENST00000391270 109 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 AL606923.1-201ENST00000406616 190 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 PMCHL1-202ENST00000423102 261 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 TIMM9P1-201ENST00000436122 256 ntBASIC2.68□□□□□ -1.98
COL2A1P02458 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms