Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AP000860.1-201ENST00000605250 559 ntBASIC0.53□□□□□ -2.32
TNFP01375 AL022345.2-201ENST00000606307 135 ntBASIC0.53□□□□□ -2.32
TNFP01375 AC027335.2-201ENST00000624030 375 ntBASIC0.53□□□□□ -2.32
TNFP01375 AC079416.3-201ENST00000624479 549 ntBASIC0.53□□□□□ -2.32
TNFP01375 SNORD114-26-201ENST00000363543 72 ntBASIC0.52□□□□□ -2.33
TNFP01375 SNORA25-201ENST00000384384 134 ntBASIC0.52□□□□□ -2.33
TNFP01375 RNU6-16P-201ENST00000384385 107 ntBASIC0.52□□□□□ -2.33
TNFP01375 RNY1P4-201ENST00000384595 115 ntBASIC0.52□□□□□ -2.33
TNFP01375 CCNG1P1-201ENST00000406783 885 ntBASIC0.52□□□□□ -2.33
TNFP01375 RNU2-48P-201ENST00000410694 191 ntBASIC0.52□□□□□ -2.33
TNFP01375 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.52□□□□□ -2.33
TNFP01375 AC098934.3-201ENST00000430450 190 ntBASIC0.52□□□□□ -2.33
TNFP01375 MTND2P21-201ENST00000436242 1042 ntBASIC0.52□□□□□ -2.33
TNFP01375 RPS15AP9-201ENST00000439856 381 ntBASIC0.52□□□□□ -2.33
TNFP01375 AC132479.1-201ENST00000449160 144 ntBASIC0.52□□□□□ -2.33
TNFP01375 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.52□□□□□ -2.33
TNFP01375 AC136628.3-201ENST00000521868 290 ntBASIC0.52□□□□□ -2.33
TNFP01375 AC243829.3-201ENST00000622177 108 ntBASIC0.52□□□□□ -2.33
TNFP01375 MIR5087-201ENST00000635826 76 ntBASIC0.52□□□□□ -2.33
TNFP01375 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.52□□□□□ -2.33
TNFP01375 DDX43P2-201ENST00000604753 1354 ntBASIC0.52□□□□□ -2.33
TNFP01375 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.52□□□□□ -2.33
TNFP01375 RNA5SP499-201ENST00000363982 119 ntBASIC0.51□□□□□ -2.33
TNFP01375 EIF1P1-201ENST00000421436 341 ntBASIC0.51□□□□□ -2.33
TNFP01375 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.51□□□□□ -2.33
TNFP01375 RPL31P3-201ENST00000458430 332 ntBASIC0.51□□□□□ -2.33
TNFP01375 AL163195.1-201ENST00000496941 348 ntBASIC0.51□□□□□ -2.33
TNFP01375 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.51□□□□□ -2.33
TNFP01375 AC104806.1-201ENST00000508720 308 ntBASIC0.51□□□□□ -2.33
TNFP01375 RNU6-496P-201ENST00000516145 99 ntBASIC0.51□□□□□ -2.33
TNFP01375 AC109329.1-201ENST00000518744 317 ntBASIC0.51□□□□□ -2.33
TNFP01375 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.51□□□□□ -2.33
TNFP01375 MIR4711-201ENST00000578274 70 ntBASIC0.51□□□□□ -2.33
TNFP01375 AC008088.1-201ENST00000580993 280 ntBASIC0.51□□□□□ -2.33
TNFP01375 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.51□□□□□ -2.33
TNFP01375 AC021171.1-201ENST00000603137 706 ntBASIC0.51□□□□□ -2.33
TNFP01375 AC112191.3-201ENST00000604371 277 ntBASIC0.51□□□□□ -2.33
TNFP01375 RNU5E-8P-201ENST00000363502 116 ntBASIC0.5□□□□□ -2.33
TNFP01375 RNU6-1065P-201ENST00000384513 106 ntBASIC0.5□□□□□ -2.33
TNFP01375 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
TNFP01375 MRPL35P1-201ENST00000404272 572 ntBASIC0.5□□□□□ -2.33
TNFP01375 RNU6-733P-201ENST00000410759 104 ntBASIC0.5□□□□□ -2.33
TNFP01375 RNU2-32P-201ENST00000411193 191 ntBASIC0.5□□□□□ -2.33
TNFP01375 NEFMP1-201ENST00000443423 1006 ntBASIC0.5□□□□□ -2.33
TNFP01375 RAP1BP2-201ENST00000478270 544 ntBASIC0.5□□□□□ -2.33
TNFP01375 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.5□□□□□ -2.33
TNFP01375 RNU6-416P-201ENST00000516265 103 ntBASIC0.5□□□□□ -2.33
TNFP01375 AC022616.8-201ENST00000533569 253 ntBASIC0.5□□□□□ -2.33
TNFP01375 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.5□□□□□ -2.33
TNFP01375 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.5□□□□□ -2.33
TNFP01375 AL355598.1-201ENST00000604169 202 ntBASIC0.5□□□□□ -2.33
TNFP01375 AC006270.3-201ENST00000605967 1036 ntBASIC0.5□□□□□ -2.33
TNFP01375 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.5□□□□□ -2.33
TNFP01375 MTND4P16-201ENST00000466108 1367 ntBASIC0.49□□□□□ -2.33
TNFP01375 RNU6-819P-201ENST00000364116 107 ntBASIC0.49□□□□□ -2.33
TNFP01375 RNU6-658P-201ENST00000384606 106 ntBASIC0.49□□□□□ -2.33
TNFP01375 MIR7-1-201ENST00000384871 110 ntBASIC0.49□□□□□ -2.33
TNFP01375 RNA5SP193-201ENST00000410353 107 ntBASIC0.49□□□□□ -2.33
TNFP01375 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.49□□□□□ -2.33
TNFP01375 AC083875.1-201ENST00000419509 405 ntBASIC0.49□□□□□ -2.33
TNFP01375 AL451054.2-201ENST00000420896 202 ntBASIC0.49□□□□□ -2.33
TNFP01375 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
TNFP01375 MTCO3P5-201ENST00000433620 714 ntBASIC0.49□□□□□ -2.33
TNFP01375 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.49□□□□□ -2.33
TNFP01375 AC092001.1-201ENST00000453012 261 ntBASIC0.49□□□□□ -2.33
TNFP01375 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.49□□□□□ -2.33
TNFP01375 RNU6-581P-201ENST00000516214 105 ntBASIC0.49□□□□□ -2.33
TNFP01375 AP003484.1-201ENST00000530974 250 ntBASIC0.49□□□□□ -2.33
TNFP01375 RPL30P11-203ENST00000598995 310 ntBASIC0.49□□□□□ -2.33
TNFP01375 AC004853.1-201ENST00000604902 698 ntBASIC0.49□□□□□ -2.33
TNFP01375 AC007742.2-201ENST00000618226 398 ntBASIC0.49□□□□□ -2.33
TNFP01375 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.49□□□□□ -2.33
TNFP01375 OR4G3P-201ENST00000633500 913 ntBASIC0.49□□□□□ -2.33
TNFP01375 AL590396.4-201ENST00000636779 956 ntBASIC0.49□□□□□ -2.33
TNFP01375 AC100821.1-201ENST00000523153 2479 ntBASIC0.49□□□□□ -2.33
TNFP01375 ELL2P3-201ENST00000457883 1602 ntBASIC0.49□□□□□ -2.33
TNFP01375 AL589743.1-201ENST00000551932 2712 ntBASIC0.48□□□□□ -2.33
TNFP01375 SNORD114-23-201ENST00000363536 72 ntBASIC0.48□□□□□ -2.33
TNFP01375 Y_RNA.245-201ENST00000364493 95 ntBASIC0.48□□□□□ -2.33
TNFP01375 RPL23AP32-201ENST00000395315 459 ntBASIC0.48□□□□□ -2.33
TNFP01375 AL117342.1-201ENST00000404861 406 ntBASIC0.48□□□□□ -2.33
TNFP01375 ELOCP14-201ENST00000428070 331 ntBASIC0.48□□□□□ -2.33
TNFP01375 ELOCP7-201ENST00000439968 331 ntBASIC0.48□□□□□ -2.33
TNFP01375 CECR9-201ENST00000453421 199 ntBASIC0.48□□□□□ -2.33
TNFP01375 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.48□□□□□ -2.33
TNFP01375 HMGN2P9-201ENST00000476875 229 ntBASIC0.48□□□□□ -2.33
TNFP01375 RPS27P22-201ENST00000478056 241 ntBASIC0.48□□□□□ -2.33
TNFP01375 AC108078.1-201ENST00000508073 725 ntBASIC0.48□□□□□ -2.33
TNFP01375 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.48□□□□□ -2.33
TNFP01375 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.48□□□□□ -2.33
TNFP01375 CYCSP23-201ENST00000519781 313 ntBASIC0.48□□□□□ -2.33
TNFP01375 CLIC4P2-201ENST00000601934 717 ntBASIC0.48□□□□□ -2.33
TNFP01375 AC004908.3-201ENST00000610248 625 ntBASIC0.48□□□□□ -2.33
TNFP01375 AC084824.5-201ENST00000612009 413 ntBASIC0.48□□□□□ -2.33
TNFP01375 AC009033.1-201ENST00000624279 431 ntBASIC0.48□□□□□ -2.33
TNFP01375 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
TNFP01375 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
TNFP01375 AL133475.1-201ENST00000404414 305 ntBASIC0.47□□□□□ -2.33
TNFP01375 AL139397.2-201ENST00000404529 772 ntBASIC0.47□□□□□ -2.33
TNFP01375 EBAG9P1-201ENST00000418955 543 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms