Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.46□□□□□ -2.02
PDGFBP01127 RNU6-179P-201ENST00000363350 107 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 RNA5SP393-201ENST00000363423 117 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 SNORA67.1-201ENST00000364749 141 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 RNU6-116P-201ENST00000384042 109 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 RNU6-1042P-201ENST00000384204 107 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 RN7SKP32-201ENST00000410167 303 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 AL663109.1-201ENST00000411498 844 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 AC080125.1-201ENST00000414888 684 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 AL096701.2-201ENST00000416920 238 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 PIGFP2-201ENST00000421400 651 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PDGFBP01127 AC007560.1-201ENST00000426912 237 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 MED13P1-201ENST00000428342 171 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 Z98742.2-201ENST00000431564 187 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 AL591704.1-201ENST00000432574 275 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.46□□□□□ -2.02
PDGFBP01127 GSTA11P-201ENST00000452866 669 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 RPS29P15-201ENST00000458329 171 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 RPL23AP42-201ENST00000471152 471 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 MTND3P5-201ENST00000512798 333 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 AC108729.3-201ENST00000513484 108 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 MIR892C-201ENST00000516410 77 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.46□□□□□ -2.02
PDGFBP01127 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.46□□□□□ -2.02
PDGFBP01127 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.46□□□□□ -2.02
PDGFBP01127 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.46□□□□□ -2.02
PDGFBP01127 MIR4781-201ENST00000585250 76 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.46□□□□□ -2.02
PDGFBP01127 AC023043.3-201ENST00000593113 385 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 AC007684.1-201ENST00000609671 477 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 AC009318.2-201ENST00000610917 651 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 Z99129.1-201ENST00000612510 255 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 MIR6134-201ENST00000617606 109 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 AC093648.1-201ENST00000623546 606 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 AL157786.1-207ENST00000627771 695 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 U6.114-201ENST00000636407 96 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 CDC27P3-201ENST00000635418 1910 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 Z82195.2-201ENST00000612348 18351 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
PDGFBP01127 SNORA64-201ENST00000384674 134 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 SNORA80E-201ENST00000384744 137 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 MIR218-1-201ENST00000384999 110 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 MIR524-201ENST00000385242 87 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
PDGFBP01127 AC068050.1-201ENST00000394891 380 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 AL591416.1-201ENST00000404015 867 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 AL451074.5-201ENST00000415894 435 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 MTND3P17-201ENST00000416968 344 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.45□□□□□ -2.02
PDGFBP01127 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.45□□□□□ -2.02
PDGFBP01127 AL162395.1-201ENST00000457882 422 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 AP000852.1-201ENST00000472460 573 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 AC023194.1-201ENST00000493084 308 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.45□□□□□ -2.02
PDGFBP01127 AC104806.1-201ENST00000508720 308 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.45□□□□□ -2.02
PDGFBP01127 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.45□□□□□ -2.02
PDGFBP01127 RNU6-1053P-201ENST00000515930 101 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 RNU6-410P-201ENST00000517006 107 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.45□□□□□ -2.02
PDGFBP01127 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.45□□□□□ -2.02
PDGFBP01127 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.45□□□□□ -2.02
PDGFBP01127 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.45□□□□□ -2.02
PDGFBP01127 AP002963.1-201ENST00000530590 184 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.45□□□□□ -2.02
PDGFBP01127 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.45□□□□□ -2.02
PDGFBP01127 AC004223.2-201ENST00000590309 544 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 AC087683.1-201ENST00000591187 441 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 AC138649.3-201ENST00000622154 254 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PDGFBP01127 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PDGFBP01127 AC069528.2-201ENST00000624849 1991 ntBASIC2.45□□□□□ -2.02
PDGFBP01127 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.44□□□□□ -2.02
PDGFBP01127 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.44□□□□□ -2.02
PDGFBP01127 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
PDGFBP01127 Y_RNA.194-201ENST00000363985 102 ntBASIC2.44□□□□□ -2.02
PDGFBP01127 Y_RNA.367-201ENST00000365544 101 ntBASIC2.44□□□□□ -2.02
PDGFBP01127 Y_RNA.409-201ENST00000383990 98 ntBASIC2.44□□□□□ -2.02
PDGFBP01127 RNU1-52P-201ENST00000384190 164 ntBASIC2.44□□□□□ -2.02
PDGFBP01127 Y_RNA.517-201ENST00000384551 106 ntBASIC2.44□□□□□ -2.02
PDGFBP01127 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.44□□□□□ -2.02
PDGFBP01127 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.44□□□□□ -2.02
PDGFBP01127 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.44□□□□□ -2.02
PDGFBP01127 MTCO2P11-201ENST00000431069 680 ntBASIC2.44□□□□□ -2.02
PDGFBP01127 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.44□□□□□ -2.02
PDGFBP01127 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.44□□□□□ -2.02
PDGFBP01127 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.44□□□□□ -2.02
PDGFBP01127 AC092001.1-201ENST00000453012 261 ntBASIC2.44□□□□□ -2.02
PDGFBP01127 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.44□□□□□ -2.02
PDGFBP01127 AL139109.1-201ENST00000455491 297 ntBASIC2.44□□□□□ -2.02
PDGFBP01127 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.44□□□□□ -2.02
PDGFBP01127 AC008571.1-201ENST00000467232 300 ntBASIC2.44□□□□□ -2.02
PDGFBP01127 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.44□□□□□ -2.02
PDGFBP01127 AC026436.1-201ENST00000510537 270 ntBASIC2.44□□□□□ -2.02
PDGFBP01127 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.44□□□□□ -2.02
PDGFBP01127 RNU6-1315P-201ENST00000517187 99 ntBASIC2.44□□□□□ -2.02
PDGFBP01127 AC025755.1-201ENST00000521306 278 ntBASIC2.44□□□□□ -2.02
PDGFBP01127 FAM92A1P1-201ENST00000528023 890 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms