Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 SCARNA4-202ENST00000625402 129 ntBASIC2.13□□□□□ -2.07
MBD3O95983 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
MBD3O95983 RNU6-371P-201ENST00000364283 108 ntBASIC2.12□□□□□ -2.07
MBD3O95983 SNORD14B-201ENST00000364533 90 ntBASIC2.12□□□□□ -2.07
MBD3O95983 RNU6-169P-201ENST00000365336 107 ntBASIC2.12□□□□□ -2.07
MBD3O95983 RNU6-61P-201ENST00000365528 109 ntBASIC2.12□□□□□ -2.07
MBD3O95983 Y_RNA.560-201ENST00000384689 102 ntBASIC2.12□□□□□ -2.07
MBD3O95983 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.12□□□□□ -2.07
MBD3O95983 CALM2P2-201ENST00000428512 440 ntBASIC2.12□□□□□ -2.07
MBD3O95983 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.12□□□□□ -2.07
MBD3O95983 AL445646.1-201ENST00000431784 216 ntBASIC2.12□□□□□ -2.07
MBD3O95983 IPO7P1-201ENST00000442031 636 ntBASIC2.12□□□□□ -2.07
MBD3O95983 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.12□□□□□ -2.07
MBD3O95983 PPP1R2P5-201ENST00000457256 603 ntBASIC2.12□□□□□ -2.07
MBD3O95983 RAP1BP2-201ENST00000478270 544 ntBASIC2.12□□□□□ -2.07
MBD3O95983 AL049873.1-201ENST00000480540 376 ntBASIC2.12□□□□□ -2.07
MBD3O95983 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.12□□□□□ -2.07
MBD3O95983 SNORA25.11-201ENST00000515935 105 ntBASIC2.12□□□□□ -2.07
MBD3O95983 SNORA48.11-201ENST00000517015 89 ntBASIC2.12□□□□□ -2.07
MBD3O95983 RNU6-685P-201ENST00000517088 95 ntBASIC2.12□□□□□ -2.07
MBD3O95983 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.12□□□□□ -2.07
MBD3O95983 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.12□□□□□ -2.07
MBD3O95983 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.12□□□□□ -2.07
MBD3O95983 AC009063.1-201ENST00000563342 702 ntBASIC2.12□□□□□ -2.07
MBD3O95983 MIR4419B-201ENST00000577260 68 ntBASIC2.12□□□□□ -2.07
MBD3O95983 MIR4513-201ENST00000581077 86 ntBASIC2.12□□□□□ -2.07
MBD3O95983 AC008521.1-201ENST00000587471 187 ntBASIC2.12□□□□□ -2.07
MBD3O95983 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
MBD3O95983 MTND5P17-201ENST00000418405 1603 ntBASIC2.12□□□□□ -2.07
MBD3O95983 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.11□□□□□ -2.07
MBD3O95983 RNU4-91P-201ENST00000364778 135 ntBASIC2.11□□□□□ -2.07
MBD3O95983 SNORD48-201ENST00000364953 64 ntBASIC2.11□□□□□ -2.07
MBD3O95983 SNORA20.2-201ENST00000383922 131 ntBASIC2.11□□□□□ -2.07
MBD3O95983 MIR561-201ENST00000385216 97 ntBASIC2.11□□□□□ -2.07
MBD3O95983 RPS3AP3-201ENST00000411933 242 ntBASIC2.11□□□□□ -2.07
MBD3O95983 AL356320.1-201ENST00000429616 163 ntBASIC2.11□□□□□ -2.07
MBD3O95983 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.11□□□□□ -2.07
MBD3O95983 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.11□□□□□ -2.07
MBD3O95983 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.11□□□□□ -2.07
MBD3O95983 AC114781.4-201ENST00000513707 639 ntBASIC2.11□□□□□ -2.07
MBD3O95983 RNU6-123P-201ENST00000516163 102 ntBASIC2.11□□□□□ -2.07
MBD3O95983 Vault.3-201ENST00000516676 95 ntBASIC2.11□□□□□ -2.07
MBD3O95983 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.11□□□□□ -2.07
MBD3O95983 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.11□□□□□ -2.07
MBD3O95983 MTATP6P24-201ENST00000576835 677 ntBASIC2.11□□□□□ -2.07
MBD3O95983 AC005771.1-201ENST00000585581 349 ntBASIC2.11□□□□□ -2.07
MBD3O95983 AL355297.2-201ENST00000604792 129 ntBASIC2.11□□□□□ -2.07
MBD3O95983 AC008121.3-201ENST00000618726 433 ntBASIC2.11□□□□□ -2.07
MBD3O95983 AL603755.1-201ENST00000619504 163 ntBASIC2.11□□□□□ -2.07
MBD3O95983 MIR219B-201ENST00000637023 88 ntBASIC2.11□□□□□ -2.07
MBD3O95983 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.11□□□□□ -2.07
MBD3O95983 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.11□□□□□ -2.07
MBD3O95983 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MBD3O95983 AC131280.1-202ENST00000624067 4211 ntBASIC2.11□□□□□ -2.07
MBD3O95983 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
MBD3O95983 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
MBD3O95983 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
MBD3O95983 U8.3-201ENST00000363321 132 ntBASIC2.1□□□□□ -2.07
MBD3O95983 RNU6-529P-201ENST00000363383 104 ntBASIC2.1□□□□□ -2.07
MBD3O95983 UBE2V1P2-201ENST00000397758 440 ntBASIC2.1□□□□□ -2.07
MBD3O95983 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.1□□□□□ -2.07
MBD3O95983 RNU2-2P-201ENST00000410396 191 ntBASIC2.1□□□□□ -2.07
MBD3O95983 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.1□□□□□ -2.07
MBD3O95983 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.1□□□□□ -2.07
MBD3O95983 MTCO3P5-201ENST00000433620 714 ntBASIC2.1□□□□□ -2.07
MBD3O95983 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.1□□□□□ -2.07
MBD3O95983 PSPHP1-201ENST00000450062 261 ntBASIC2.1□□□□□ -2.07
MBD3O95983 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.1□□□□□ -2.07
MBD3O95983 snoU109.1-201ENST00000459339 135 ntBASIC2.1□□□□□ -2.07
MBD3O95983 HMGB1P30-201ENST00000492455 606 ntBASIC2.1□□□□□ -2.07
MBD3O95983 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.1□□□□□ -2.07
MBD3O95983 MIR514B-201ENST00000516774 80 ntBASIC2.1□□□□□ -2.07
MBD3O95983 AC007375.1-201ENST00000554513 578 ntBASIC2.1□□□□□ -2.07
MBD3O95983 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.1□□□□□ -2.07
MBD3O95983 MIR3618-201ENST00000580330 88 ntBASIC2.1□□□□□ -2.07
MBD3O95983 AL713866.2-201ENST00000603579 219 ntBASIC2.1□□□□□ -2.07
MBD3O95983 AL158032.1-201ENST00000605401 106 ntBASIC2.1□□□□□ -2.07
MBD3O95983 AC021646.1-201ENST00000605469 484 ntBASIC2.1□□□□□ -2.07
MBD3O95983 AC098614.4-201ENST00000607601 462 ntBASIC2.1□□□□□ -2.07
MBD3O95983 U2.15-201ENST00000611544 191 ntBASIC2.1□□□□□ -2.07
MBD3O95983 U2.16-201ENST00000613119 191 ntBASIC2.1□□□□□ -2.07
MBD3O95983 U2.12-201ENST00000613778 191 ntBASIC2.1□□□□□ -2.07
MBD3O95983 U2.20-201ENST00000613956 192 ntBASIC2.1□□□□□ -2.07
MBD3O95983 U2.9-201ENST00000615427 191 ntBASIC2.1□□□□□ -2.07
MBD3O95983 U2.11-201ENST00000616345 191 ntBASIC2.1□□□□□ -2.07
MBD3O95983 U2.2-201ENST00000616535 191 ntBASIC2.1□□□□□ -2.07
MBD3O95983 U2.3-201ENST00000617785 191 ntBASIC2.1□□□□□ -2.07
MBD3O95983 U2.19-201ENST00000618602 191 ntBASIC2.1□□□□□ -2.07
MBD3O95983 RNU2-1-201ENST00000618664 191 ntBASIC2.1□□□□□ -2.07
MBD3O95983 U2.6-201ENST00000619225 191 ntBASIC2.1□□□□□ -2.07
MBD3O95983 U2.5-201ENST00000619465 191 ntBASIC2.1□□□□□ -2.07
MBD3O95983 U2.10-201ENST00000620268 191 ntBASIC2.1□□□□□ -2.07
MBD3O95983 AF246928.1-201ENST00000623768 87 ntBASIC2.1□□□□□ -2.07
MBD3O95983 AL157786.1-207ENST00000627771 695 ntBASIC2.1□□□□□ -2.07
MBD3O95983 AC008993.2-201ENST00000631744 806 ntBASIC2.1□□□□□ -2.07
MBD3O95983 ZNF355P-201ENST00000427301 3216 ntBASIC2.1□□□□□ -2.07
MBD3O95983 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
MBD3O95983 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.09□□□□□ -2.07
MBD3O95983 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
MBD3O95983 RNU6-641P-201ENST00000384006 107 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 158.8 ms