Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 Y_RNA.112-201ENST00000363250 102 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 Y_RNA.132-201ENST00000363421 102 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 RNA5SP51-201ENST00000364750 119 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 RNU6-692P-201ENST00000384496 107 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 MIR128-1-201ENST00000384921 82 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 MIR10A-201ENST00000385043 110 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 MIR559-201ENST00000385188 96 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 MIR591-201ENST00000385290 95 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 U3.19-201ENST00000390893 196 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 U3.26-201ENST00000391236 204 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 AL030996.1-201ENST00000411430 235 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 ATP5A1P2-201ENST00000412323 255 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS4BO75351 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS4BO75351 AL137792.2-201ENST00000443484 235 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS4BO75351 AC013470.1-201ENST00000453438 462 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 RPL12P25-201ENST00000455592 494 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 AC021205.2-201ENST00000480069 347 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS4BO75351 Y_RNA.711-201ENST00000516993 102 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 AC022634.1-201ENST00000520765 532 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS4BO75351 CYCSP39-201ENST00000565821 309 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS4BO75351 CPDP1-201ENST00000579660 283 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 AC011494.1-201ENST00000596454 237 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 AL355598.1-201ENST00000604169 202 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 AC009229.3-201ENST00000608056 282 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 AL591516.1-201ENST00000611326 274 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 PLCE1P1-201ENST00000622094 305 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 uc_338.22-201ENST00000622722 187 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 AC244517.12-201ENST00000623581 663 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 AC138627.2-201ENST00000624202 601 ntBASIC3.43□□□□□ -1.86
VPS4BO75351 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS4BO75351 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS4BO75351 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS4BO75351 CUL1P1-201ENST00000509510 2425 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS4BO75351 RNA5SP295-201ENST00000362655 121 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 RNU6-596P-201ENST00000365395 98 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VPS4BO75351 Z98749.2-208ENST00000381646 500 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 Y_RNA.404-201ENST00000383978 102 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 EI24P2-201ENST00000397776 1076 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 AL445529.1-201ENST00000398713 389 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 MIR888-201ENST00000401186 77 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 AL117339.3-201ENST00000418733 162 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS4BO75351 USP9YP30-201ENST00000430729 455 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 AL049873.1-201ENST00000480540 376 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 AC113155.1-201ENST00000511141 769 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 RNU6-1213P-201ENST00000517075 94 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 NDUFB9P3-201ENST00000521269 501 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 IGHV3-76-201ENST00000522465 295 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 AC007991.1-201ENST00000522680 631 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 AC104576.1-201ENST00000524225 88 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS4BO75351 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS4BO75351 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS4BO75351 PART1_1.1-201ENST00000611761 217 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 AC133104.2-201ENST00000615272 193 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.42□□□□□ -1.86
VPS4BO75351 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VPS4BO75351 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
VPS4BO75351 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VPS4BO75351 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
VPS4BO75351 MTND4P27-201ENST00000450813 1354 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS4BO75351 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS4BO75351 ZNF826P-207ENST00000622273 1910 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-37P-201ENST00000362692 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-270P-201ENST00000364131 105 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-11P-201ENST00000364234 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-7-201ENST00000364784 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-8-201ENST00000365467 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 AP002088.1-201ENST00000382740 395 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-25P-201ENST00000383873 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-1-201ENST00000383898 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-48P-201ENST00000384161 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-36P-201ENST00000384172 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-4P-201ENST00000384205 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-5P-201ENST00000384238 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-3P-201ENST00000384314 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-16P-201ENST00000384385 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-1035P-201ENST00000384477 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-15P-201ENST00000384534 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-2-201ENST00000384627 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-29P-201ENST00000384637 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-9-201ENST00000384776 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-33P-201ENST00000384793 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 SNORA75.6-201ENST00000391318 127 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 AL591034.1-201ENST00000407447 340 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RNA5SP31-201ENST00000411144 127 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS4BO75351 RPL26P27-201ENST00000414397 437 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms